Trifolium pratense (red clover): 123894615
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Entry
123894615 CDS
T08949
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123894615
03041 Spliceosome [BR:
tpra03041
]
123894615
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123894615
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123894615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
RRM_8
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
123894615
NCBI-ProteinID:
XP_045800622
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All DBs
Position
LG7:complement(4174599..4182172)
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AA seq
439 aa
AA seq
DB search
MQQRIKLQQQQQALMQQALLQQQQMYHHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSV
YVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQL
YGQALKVNWAYANSSREDTSGHFNVFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKT
GRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSSTEEKINDSQNAVV
LTNGSSDGGQDNGNEDAPENNPSYTTVYVGNLPHDVTQAELHCQFHALGAGVLEEVRIQR
DKGFGFVRYNTHEEAALAIQLANGRPVRGKTMKCSWGSKPTPPGTASNPLPPPAAQPYQI
LPTAGMNQGYSSPAELLAYQRQLALSQAAVSGLSGQALLQMSGQHGLAPASMGINSAASQ
AMYDGYNGNSSRQQLMYYR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaagaatcaagctgcaacaacaacaacaagcactcatgcagcaagctttgctt
cagcaacagcagatgtaccatcaccccggcatgctcgccgctgccgctatgactcagatg
gagcctgtaccgagtggaaatctgcctcctgggtttgatgcttctgcatgccgtagtgtt
tatgtaggaaatattcatgtaaatgtcactgataaacttcttgcggaagtctttcagagt
gctggccctcttgctgggtgcaagctcataagaaaagaaaagtcctcttatggttttgtg
gactaccatgatcgagcatccgcagcgcttgcaataatgacattgcatggaagacaacta
tatggtcaagcactcaaggtgaattgggcatatgccaatagcagtagggaggatacctca
gggcacttcaatgtatttgttggtgatttgagtccagaggttacagatgcaactttattt
gcatgcttctcagtctatactacttgttctgatgccagggttatgtgggatcacaaaact
ggccgctcaaaaggatatggttttgtttctttccgtgatcatcaggatgcccaaagtgcc
atcaatgatatgacgggtaaatggctgggaaataggcaaataagatgcaattgggcaact
aaaggagctggtggcagctcaactgaagagaaaatcaatgacagccaaaatgctgttgtg
ctaacaaatggatcttcagatggaggtcaagataatggcaatgaggatgctcctgaaaac
aatccttcgtacacaacagtttatgttggcaaccttccccatgatgtaacacaagctgaa
ctccattgtcaattccatgcattgggggctggggtacttgaggaggtccgaattcagagg
gataagggttttggatttgtcagatacaatactcatgaggaagcagcattggccattcag
ctggctaatgggagaccagttcgtgggaagactatgaagtgttcatggggtagcaaacca
actcctcctgggacagcgtcaaatccattacctcctcctgctgcacaaccatatcaaata
cttcctactgcagggatgaaccaaggctattcttcgcccgctgagttgttggcttatcag
cgccagttggccttgagtcaggccgctgtatctggcctttcaggacaagctcttctccaa
atgtctggacagcatggcctagctcctgcatcaatgggtataaactctgcagcatctcaa
gccatgtatgacggatataatggtaattcatcaagacagcagcttatgtactatcgttga
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