Trifolium pratense (red clover): 123894716
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Entry
123894716 CDS
T08949
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00520
Amino sugar and nucleotide sugar metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
123894716
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
123894716
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Gene cluster
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Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
123894716
NCBI-ProteinID:
XP_045800729
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Position
LG7:complement(51596850..51599078)
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AA seq
661 aa
AA seq
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MYFSHSFSGLLFSLIVCLVISECYADINANPNASQNISKLVIDAGSGRNIPDTLFGVFYE
EINHAGAGGLWAELVNNRGFEGGVAANLPPIYPWKIIGENQSSITVSTDLSSCFERNKIA
LRMDILCQGTSCPSGGVGISNPGYWGMNVEQGKSYKVVFYVRALGPIDLEVSFVGTDDGV
KLGSTNVNVDGLNVTKWSRMERIIKATGTNHNSSLQITTTNKGVLWLDQVSAMPLDTYKG
HGFRSDLFKMVADLKPKFLRFPGGCYVEGDYIKNAFRWKDSVGPWEERAGHLDDIWHYWS
DDGLGYFEGLQLAEDLGALPVWVFNNGFSHHDEVSTDLIQPFVDEALDGIEFARGPATSR
WGSLRASMGHPEPFNLRFVAIGNEDCGKKYYEGNYMKFYEVIRRTYPDIQMISNCDGSDV
PLNHPADIYDYHIYTNSQDMFSKHTKFDKSPRSGPKAFVSEYAVWKEDAGVGSLYAAVAE
AAFLIGIERNSDVVSMVSYAPLLLNTNDRGWIPDAIVFNSYQSYGTPSYWVQRLFTESSG
ATLLNSTLQTSSPAIVASTIKYKNSQDGKNYLRVKVVNFGKDIENLEISINDIENLMDGL
NTNLQPSASSMVVLTSSNIMDENSFSEPMKIVPRRSVFGDASNGMNVKLSPYSVTSLDLL
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtatttctcacattcctttagcggtttacttttctctttgattgtgtgtttggtcatt
tctgagtgctatgctgatattaatgctaatcccaatgctagccagaacatatcaaagtta
gtgattgatgcaggttctggaagaaatattccagatacattgtttggagtattttatgag
gagattaatcatgcaggagctgggggattatgggcagaacttgtgaataatagaggcttt
gaaggaggagttgctgccaatcttccccccatttatccatggaaaattattggagagaat
caatcatccattactgtatcaactgatctttcctcttgttttgagcgtaataaaattgca
ttacgcatggatattctatgtcaaggaacatcttgtccaagtggtggtgttggtatttcc
aatcctggttattggggcatgaatgttgaacaagggaaaagctacaaagtagttttctat
gttagagcacttggtccaattgatttagaagtgtcatttgtcggaacagacgatggtgta
aaattgggttcaacgaacgtaaacgtcgatggacttaatgttacaaaatggagtaggatg
gagagaattattaaagctacaggcacaaatcataattctagtctacaaataacaacaaca
aataaaggggtattatggttagatcaagtgtcagctatgcctttggatacatataaaggt
catggtttccgaagtgatctttttaaaatggtggcagatttgaaaccaaaatttttaaga
ttccctggtggttgttatgtcgaaggagattatataaaaaatgcttttaggtggaaagat
tcagttgggccatgggaagagagagctggtcacttagacgacatttggcattattggagt
gacgatggacttggttattttgagggtcttcaactagcagaggatcttggtgcattacct
gtatgggtgttcaataatggttttagccatcacgatgaagttagtactgatttaattcaa
ccatttgtggatgaagctctagatggcattgagtttgctagaggtcctgccacatcacga
tggggttctcttagagcttccatgggacatcctgaaccatttaatttgagatttgttgct
attggaaatgaagattgtggtaaaaagtattatgaagggaattatatgaaattctatgaa
gttatacgacgtacttatcctgatattcagatgatatcaaactgtgacggttctgatgta
ccactaaaccatcctgcagatatctatgattaccatatttatacaaattctcaagacatg
ttttccaagcataccaagttcgataagtcaccacgatccggtccaaaggcatttgttagt
gagtatgctgtttggaaggaagatgcaggtgttggaagtctttatgcagctgttgctgaa
gctgcattccttattggaattgaaaggaatagtgatgtagttagtatggtttcatatgca
cccctccttttaaacacaaacgatagagggtggataccagatgcaattgtttttaactct
tatcagagttatggaactccaagttattgggtccaacgactctttacagaatctagtgga
gcaaccttacttaattcaactctccaaacttcttctcctgcaattgttgcatcaacaatt
aagtataaaaattctcaagatgggaaaaattatctaagagtaaaggtggtaaactttgga
aaagacattgagaacttagaaatttcaataaacgacatcgaaaacttaatggacggctta
aatacaaatttgcaaccatctgcttcatcaatggtggtgcttacgtcctccaatataatg
gatgagaattccttctcagaaccaatgaagattgtgcctcgaagatctgtatttggggat
gcaagcaatggcatgaatgttaaactttctccttattcagttacatcgttagatctatta
ttttaa
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