Trifolium pratense (red clover): 123894729
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Entry
123894729 CDS
T08949
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
tpra03015
mRNA surveillance pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123894729
09122 Translation
03013 Nucleocytoplasmic transport
123894729
03015 mRNA surveillance pathway
123894729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123894729
03041 Spliceosome [BR:
tpra03041
]
123894729
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123894729
Spliceosome [BR:
tpra03041
]
Common components
Common spliceosomal components
Cap binding complex
123894729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
123894729
NCBI-ProteinID:
XP_045800749
LinkDB
All DBs
Position
LG7:51699617..51703262
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AA seq
261 aa
AA seq
DB search
MASLFKDPAKISAYRDRRFPGNQEEFEHALITSTTVYVGNMSFYTTEEQIYELFSRAGEI
KKIIMGLDKNTKTPCGFSFVSYYSREDTEDACKYISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEVQRHLVDYGTGSLGSFPPVIPSYGGRHG
GGHGHGGGYGHGGSRRHGRDYPRKRYRDDDRHHTNEPSKRSSDHESRRNSDHESRPQEKN
PRFRESGDSDDDEEDDRKRRG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttattcaaggatccggcgaagatctcggcgtatcgagatagaagattccct
ggaaatcaagaagagtttgagcatgcgttgattacttcaaccaccgtttatgttgggaat
atgtcgttttacactacggaagaacaaatttatgaacttttttcacgagctggtgaaatt
aagaagattatcatgggtttggataagaacactaaaactccttgcggtttttccttcgtt
tcatattactctcgcgaggatactgaggatgcctgcaaatatataagtggaacgatactg
gatgatcgccctattcgtgttgattttgactggggatttcaggatggaaggcaatggggt
cggggtcgtagtggtggccaggtccgtgatgaatatcgcactgattatgatccaggtaga
ggtggatatgggaagttggttcagaaagagttagaagtacagaggcatcttgtagattat
ggcactggttctttgggatcttttccgcctgttattccttcatatggtggtagacatggt
ggtggccatggtcatggtggtggttatggtcatggtggttctcgtcggcatggtagagat
taccctaggaagagatatagagacgatgatcgccaccacacaaacgagccctcaaaaaga
tcatcagatcatgaatctcggaggaactctgaccatgaatctagaccgcaggaaaaaaat
ccacgatttcgggagagtggtgattctgacgatgatgaagaagatgatcgaaaaaggcgg
ggttaa
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