Trifolium pratense (red clover): 123894816
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Entry
123894816 CDS
T08949
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123894816
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123894816
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Helicases
123894816
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
123894816
NCBI-ProteinID:
XP_045800847
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All DBs
Position
LG7:complement(9231827..9239079)
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AA seq
589 aa
AA seq
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MDSEFPNKALTTTRFSDLKPPLSDPVLQALTHSGFDFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVIPLVEILRRNSSNPKPHQVLGIIISPTRELASQIYHVAQPFISSLTNVTS
MLLVGGVEVKTDMKKIEEEGANILIATPGRLHDIMNRMDVMDFKSFEILILDEADRLLDM
GFQKQINAIITQLPKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKRLNDSAASK
QLESSKIPSGLHIEYMECEADKKPSQLVDFLVKNRSKKIIIYYMTCACVDYWGVVLPRLS
VLKGFSLIPLHGKMKQSVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD
PNVFVHRSGRTARLGKQGHAVVFLLPKEESYVEFLRIRGVPLQERMCSDNAPDVVPEIRS
AATKDRDVMEKGVRAFVSYIRAYKEHHCSYIFRWKELEIGKLATGHGLLQLPLVPEVKRH
TLSTEGFEPVKDINFEDIKFRDKSREKQRKKNLLVKKEAKEKEPKPKKPKKTPIVPTAMR
KKTAKQRRAQQTVEDEEELTQEYRLLKKLKKGTIDENEYAKLTGTEDLL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggattccgagtttcctaacaaagcattaaccaccactcgtttttccgacctcaaacct
ccactttccgatcccgttcttcaagctctcacacattccggcttcgatttctgcactccc
gttcaagccgccaccattcctttactctgtagcttcaaagacgtcgccgtcgacgccgcc
actggttcaggaaaaaccctagctttcgtcattccactagtcgaaattcttcgccgcaac
tcttccaatcccaaacctcaccaggtattgggaataattatatctcctacaagggaacta
gcatcccaaatatatcatgttgcacaaccttttatttcaagtttaactaatgttacatcg
atgctactcgtcggcggagtagaagtaaaaactgatatgaagaaaattgaagaagaagga
gctaacatattgatcgccacgcctggtcgattacatgacataatgaataggatggatgtt
atggatttcaaaagctttgagattttgattttggatgaggctgatagactattggatatg
ggattccagaagcaaataaatgctatcataactcagttgcctaagcttcggagaactggc
ttattctctgctactcaaactcaggctgtggaagagcttgccaaagcaggattgaggaac
cctgttagggttgaagttcgagctgaaacaaaaagattgaatgattctgctgcatcaaag
caactagaatcttcaaagataccttcaggtcttcacattgagtacatggaatgtgaggcg
gataagaaaccatcgcagctggtagatttccttgttaagaaccgctcgaaaaaaattata
atatattatatgacttgtgcttgtgttgactattggggagttgttcttcctcgtctttct
gttttgaaaggcttctccttgatcccccttcatggaaagatgaagcagtctgtcagggag
aaggcactaacttcttttacatccctttcaaatggaattcttctgtgtacggatgttgca
gcacgtggactagacatacctggtgtagactgtatagtgcagtatgatcctcctcaagac
ccaaatgttttcgtacataggtctggtcgaactgctcggctgggtaaacaagggcatgct
gtggtcttcttattaccaaaggaggaatcttatgtagaattcttgcgtataagaggagtt
cctcttcaagagagaatgtgctccgacaatgcacctgatgttgtacctgagattcgttct
gcggcaacaaaagatcgtgatgtcatggagaagggagtcagggcttttgtttcttacatt
cgtgcttataaagagcatcactgctcttatattttcaggtggaaagaacttgaaattggc
aaattagccacgggacatggcttattgcaacttcctttagtgccggaggtaaaacgccac
acactatccactgagggatttgaaccggttaaagatatcaatttcgaggacattaagttc
agggataaatcaagggagaaacaacggaagaaaaacctgctggtaaagaaagaagccaaa
gagaaagagccaaaacctaaaaaaccaaagaaaaccccaattgtgcctactgccatgagg
aagaaaacagccaaacagagacgtgctcagcagacagttgaagatgaggaagagttgacg
caagaataccgcttgttgaagaaattgaagaaagggaccatagatgagaatgaatatgcc
aagttgacaggcactgaggatttactttga
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