Trifolium pratense (red clover): 123894845
Help
Entry
123894845 CDS
T08949
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123894845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123894845
03036 Chromosome and associated proteins [BR:
tpra03036
]
123894845
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123894845
Coactivators
SAGA/TFTC/STAGA complex
123894845
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123894845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
123894845
NCBI-ProteinID:
XP_045800877
LinkDB
All DBs
Position
LG7:9628988..9637211
Genome browser
AA seq
899 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGADVDAFQAALNRDIGGTADSGGSNNSFSQSLSTWPTFSHD
NQIDCQNQEPKIAQQQDQPLSETELKQRGPVVEQIQNVASQDANNLTLSHKQSQDECLQG
KTVPVSHQHSQTNEVQKSENNPNRESQYAKLQQMSNQQATVNEQPSSQVNSSNQVPFCLF
LPILMPQLPKDRAMQLQTLYNRLKRDEIPKDDFVRRMKGIAGDQMLRMAVAKVQQQTKGN
TGSSRLQHPVRMPSVTSSGTKFNDPHALAQVHQRSMNAAPDHSHNTSSAIQVKSEPTYST
MDISAKKSQEHDVRVVQPNQLPSSSSNAVNQETERSSVHIQGLNKQQQQHIHFPSTYGSS
GGNYNPFSGTTTSSSSSLRPQPHPHDSHIRQIPHQSIGLSHLGVDRQSSFNDPKRMPGGS
VSTVVNNTASQQNSKSWQPSAEQNSGLFTSMSYVKKEPNDLSIEQQHRHHLSNLHGLPSV
NSGQNDQGSGINQGTVKGEFSRGSVASTSMPHTTSASLPPNSASTSASQLDPTVSLSSQI
PVSTSGIMSKTPLNKTPLGQKKPLEALGSPPTPPSKKQKVSGSSLKQSIEQLNDVTAVSG
VDLGEEEEQLFSRPKEDNRVSEASRRVVQEEEESLILLKAPLQRKLIEIMTECGLKGVSN
DVERCLSLCVEERMRGVISNIIRMSKQRVDIEKTRHRTVVTSDVRQQIMTMNRKAREEWE
KKKAEADKLRKLNDVEGSSGVDGDKEKGDGRNKATKVNTEVDDKMRTNAANVAARAAVGG
NDMTSKWQLMAEQAKQKREGGTDAASGSQPTKDVGRKSSPSPGRNTKDNQERERKGPTSL
GNSAAAKKFGKNQSPGSQTRIARSISVKDVIAVLEREPQMSKSSLLYRLHERIHSDTST
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacccatctataatgaagcttcttgaagatgatgaggatgaaactatgcattcagga
gcagatgtcgacgcattccaagctgcattgaatagagacataggcggcaccgcagattct
ggtggaagcaataattcattcagtcaatcattatcaacttggccaacttttagccatgac
aaccagattgactgtcaaaatcaggagcctaaaattgcacagcagcaagaccaaccttta
tctgaaactgagctgaagcaacgaggacctgtcgtagaacagatacagaatgttgcctca
caggatgcgaataatcttactttatcacacaaacagtctcaagatgaatgtctccaaggc
aagactgtacctgtttcccaccaacattctcaaacaaatgaagttcagaaatctgaaaat
aatcccaaccgtgaatctcagtatgcaaagctgcagcagatgagtaatcaacaggccaca
gtcaatgaacaacctagtagccaagttaatagtagtaatcaggtaccattttgcttgttt
ctccctattttgatgccccaacttcccaaagacagagccatgcaacttcaaactttatat
aacagattgaagagagatgaaatacctaaagatgattttgtacggcgtatgaaagggatt
gcgggggatcagatgcttagaatggcagtagcaaaagtgcaacaacagacaaaaggcaac
acaggttcttcaagactgcagcaccctgtaaggatgccaagtgttacttctagtggaaca
aaatttaatgatccccatgcattagcacaagttcatcagagaagtatgaatgctgctcca
gaccattctcataatacttcttcggctatccaagtgaagagtgagcctacctattcaact
atggacattagtgctaaaaaatctcaggaacatgatgttcgagtagtgcaaccaaatcaa
ttaccatcatccagttctaatgccgttaatcaagaaaccgaaagatcctcagttcacata
caaggccttaataagcagcaacaacagcatatacatttcccatcgacatatggaagcagt
ggtggtaactataaccctttttctggaacaaccaccagttcatcatcatctctcagacca
caacctcatcctcatgattcgcacataaggcaaattccacatcaaagcattggtttaagt
cacttaggtgtagaccggcagagttctttcaatgatcctaagagaatgccaggtggatct
gtgtcgaccgttgtaaacaatacagcatcacaacaaaattcaaagtcttggcaaccatca
gcagaacaaaattcgggcttgtttacatctatgtcatatgtaaaaaaggaacctaatgat
ctttctattgagcagcaacataggcatcatttgtctaacttgcatgggttgccttctgtt
aattctggtcaaaatgaccagggtagtggtatcaatcaaggcactgtaaagggtgagttt
tcaagaggttctgtagcatccactagcatgccacatacaacatctgccagcttgccgcca
aattctgcttccacttctgcatctcaactggatccaactgtctctttaagctctcagatc
ccagttagcacttctggtattatgtcaaagacacctctaaataaaactcctcttggccag
aagaaaccacttgaagcacttggttctccacccactcctccaagtaagaaacaaaaggtg
tctgggtcgtctctgaaacaaagcattgagcagcttaatgatgttactgctgttagtggt
gttgatcttggggaagaggaagaacagttattttctaggcccaaggaagacaatcgagtt
tcagaagcatctcgaagagttgtgcaagaagaggaggaaagtctaattttgctgaaagct
ccattgcagagaaaattgattgagattatgactgagtgtggcttgaaaggcgtgagtaat
gatgtggaaagatgcttgtcactgtgtgtggaggagagaatgcgcggagtaataagtaac
ataattagaatgtcaaaacagcgggttgatattgagaaaacaagacataggactgttgtc
acatcagatgttcgacagcaaatcatgacaatgaataggaaagcaagggaagagtgggag
aaaaaaaaggctgaagcagacaagctccggaaactaaatgatgtagaaggtagttccgga
gttgatggtgacaaggagaagggtgatggtcgcaataaagcaacaaaggtgaacacggaa
gtagatgacaagatgaggacaaatgctgcaaatgttgcagcccgagctgctgttggggga
aatgacatgacgtcaaagtggcaacttatggctgagcaagctaagcaaaaacgtgaaggg
ggcacggacgctgcatctggttctcagccaactaaagatgttggtcgcaaatcttcaccg
tcaccaggaaggaacacaaaagataatcaagaaagggagagaaaagggccaacttctctt
gggaattcagcggctgctaagaaatttgggaaaaatcaatcccctggatctcaaactcgc
atagctcgtagcatctctgtgaaggatgtgattgcagtcttggagagggaacctcagatg
tccaaatcatcactcttatatcgattgcatgagagaattcattctgatacttcaacttaa
DBGET
integrated database retrieval system
