Trifolium pratense (red clover): 123894882
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Entry
123894882 CDS
T08949
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123894882
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123894882
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123894882
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123894882
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123894882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
123894882
NCBI-ProteinID:
XP_045800932
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All DBs
Position
LG7:complement(40681660..40690772)
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AA seq
640 aa
AA seq
DB search
MATLQMTWQPNLLTPKRKTSPPLGLRNLGNSCYLNSVLQCLTFTPPLANFCLRSQHSSLC
DSSGSSCPFCILEKQIFRLLRLDLTSEAPSKIQSCLRIFAEHFRCGRQEDAHEFLRYVID
ACHNSCLRLKKIRKKSGGGGGGDGGASIVKEIFGGALQSQVKCLCCGYESNKVDEIMDIS
LDVFHSNSLKDSMQKFFQPEVLDGNNKYKCDGCKKLVTAKKQMSILQAPNILVIQLKRFE
GILGGKIDKTVGFEEVMVLSSFMCKTSQDPQPEYKLFGTIVHSGYSPESGHYYAYIKDAM
GRWYCCDDSCVTLASLQEVLSEKVYILFFSRTNQKPASVNGSLASNGVKPHHSNGSQASE
SPKVDVQFKAVHAKSNSEQSSRKDMPSVSKIGEVPPGLRVKFDINGSSNSKRSPAPVNVN
GKVDMFSNQPLLTNGHATNSVSLENGKKDHSSSLPTRNGFDKNKIGVANNTKWNDSTVTN
GHTNIQTVDTHSVKLDPPEDIDRSKIITVRGPGNFKQESNGVVNKTKILGNKRKVQEAPC
ILLANDSQSRARVEEMRDILGKEVKSVLSSCGWTDKVDEYMRVRKRLHEKEPGNLTSDVK
RKLIADARNAFKSKVPESLKKDLIERLKSFSQEKVQFDGP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggctactttgcagatgacctggcaacctaatctcctcactcccaaacgcaaaacttct
cctcctttaggtcttcgcaatctcggtaactcttgttacctcaatagcgttcttcagtgc
ctcactttcactcctcctctcgccaatttctgtctccgttctcaacattcatctctctgt
gattcttctggttcatcttgtcccttttgtatactcgagaaacaaatttttcgattactc
cgtttagatctcacttccgaagctccttcgaaaatccaaagctgtttacggatctttgct
gagcatttccgatgtggtcgtcaagaggacgcacatgagtttcttagatacgttattgat
gcttgtcataattcgtgtcttcgtttgaagaagattagaaagaaaagtggtggtggtggt
ggtggtgacggtggtgcttctattgttaaggagatttttggtggtgctttgcagagtcag
gttaagtgtctttgctgcggatacgaatcgaataaggttgatgagattatggatattagt
ctcgatgtttttcatagtaattcgcttaaggattctatgcagaagtttttccagcctgag
gttttagatggaaataataagtataaatgtgatggttgtaagaagttggtgacggctaag
aagcagatgtctatacttcaagcacctaatatacttgtgatacagcttaagagattcgag
ggcatattgggtggcaagatagataagactgttggatttgaagaggttatggtgctttct
agcttcatgtgcaaaacaagccaggatccacaaccagaatataagctctttggaactatt
gtgcattcaggatactcccctgaatctggtcactattatgcttatataaaggatgcaatg
ggtcgttggtattgctgtgacgattcttgtgtaacacttgcaagcctgcaagaagttttg
tcagaaaaggtttatattctgtttttctctcgaactaatcaaaagccagcgtcagtcaat
ggttctcttgcatctaatggtgtgaagccccatcattctaatgggagtcaggcatctgaa
tcccctaaggttgatgtacaattcaaagccgtccatgcaaaatcaaattctgagcaatct
tctcgtaaagatatgccaagtgtatctaaaattggtgaagttcctcccggcttgcgagta
aagtttgacattaatggtagttcaaattccaaaagaagtccggctcctgtaaatgtcaat
gggaaagttgacatgttcagtaatcagcccttgctaacaaatgggcatgcaacaaattca
gtttctttggaaaatggaaagaaagatcattcttcatcattacccaccagaaatggcttt
gacaaaaataagattggtgttgctaacaacacgaaatggaatgattcgacagttacaaat
ggacacactaatattcagacggttgatacccattctgtaaaactagatcctccggaagat
attgatagaagcaagataataacagttagagggcctggcaactttaagcaagaaagtaat
ggtgtcgtcaacaaaactaagatactggggaataagagaaaagtacaggaggctccatgc
attttgcttgcaaatgatagtcagtctcgtgctagagttgaagaaatgagagacattctt
gggaaagaagtaaagtcagttttgagctcatgtggctggacggataaggttgatgagtat
atgcgtgttagaaagaggttgcatgaaaaagaaccagggaatttaacaagtgatgttaaa
aggaagttaatagcagatgcccggaatgcttttaaatcaaaggttcccgagtcattgaaa
aaggatctgattgaacgtctcaaatcatttagccaagaaaaagtacaatttgatggacct
tga
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