Trifolium pratense (red clover): 123894897
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Entry
123894897 CDS
T08949
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123894897
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123894897
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123894897
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123894897
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123894897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
123894897
NCBI-ProteinID:
XP_045800966
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All DBs
Position
LG7:complement(40952616..40960856)
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AA seq
985 aa
AA seq
DB search
MLEPRESDIPVLFLVLVVLPLVAYILLGKWSENVKKRNQITLLAQLAAEEAFKAEEKMCV
ANLIPPQPQVYFSPSKNELHHECARCSAPAKTRCSRCKFVRYCSGNCQIIHWRLIHKQEC
QPLETHNSSSFPMAISVEEFGHGNAFYENLNNPYFGHNLNQTLRVPEPLDNLVNPPTITA
AASATADFSLFNGSSQPSTLERRPSHKSNRETRRRDSGSIYESSDFKATNSEESFLRQKS
RNSSDDSVLEEETSNSNGFGVYIYEQDGSRNTMHDEDDNYQSQYENAFASRNNFENACAS
VLSAANNDEGVDDFETNIITKGGNVVNGINHHSDEMAQHKCSPELTIKGSAKAKKQSHPS
SKVKCSKSPKSTSKTSIDFCVPETEKKAKKIPDEPKVAGNRSTIPLHGIDGVSSTGLMKM
MGLRKSTKHTALASSEGNGVRCKKAKNIKMLFPYDEFVKIFQSEVFGVWPRGLVNCGNSC
YANAVLQCLTSTKPLVVYLLYGSHSKSCISIISQSFHLNNNVNLLKMHFLIENCLLFHLG
CSKDWCLMCELEQHMMVLRENGAPLSPSRILWHMRSINCHMGDGSQEDAHEFLRLLVASM
QSICLDGLGGEKRVDPRLQETTFIQHTFGGRLQSKVKCLNCSHESERYENIMDLTLEILG
WVESLEDALAQFTSPEDLDGDNMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY
GKINKCITFPEMLDMIPFMTGTGDIPPLYALYAVVVHLDTLNASFSGHYVSYVKDLQGNW
FRVDDTEVQPVLVNQVMSEGAYILFYTRSYPRPQVEFTGKAAPQSVSDSSKHHPLEMQKP
SKPGHSRHVSQSFVSEPSHNARPEIPTHLIDTSNGFLKRSTNRNVHPVIQTYAENIRHEF
SDATSSDWSIFTSSDEASFTTESTRDSFSTVDYGDSSSNMDPISSLFNYTPENNYMKISH
SRPLTRFLPKKGHIERVQKTTIWES
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaccgcgtgaatctgatattcctgtcctgtttctggtgctggttgtacttcct
ttggtggcttatatcttacttggaaaatggagtgagaatgttaagaagagaaatcagata
actttgcttgctcaattggctgccgaagaagcctttaaagccgaagaaaaaatgtgtgtt
gctaatctaattccccctcaacctcaagtttatttttctccttcaaaaaatgagcttcat
catgagtgtgctaggtgttccgctccggctaaaactcgctgctccagatgcaagtttgtt
agatactgctcagggaattgtcaaataatccattggaggctaattcacaaacaagagtgc
cagccattggaaactcataattcaagctcgtttcctatggccatttcggttgaggaattc
ggtcatggaaatgctttttatgaaaatttaaacaatccctactttggtcacaatttgaac
cagactttaagggtgcccgagcctttggacaatttggttaaccctccgaccatcaccgcc
gcagcttctgctacagctgatttttccttatttaatggttcttctcaaccttccactttg
gagagaagaccttcacataaatccaacagagaaacgcggcgaagagattctggttcaata
tatgaatcttctgattttaaagctaccaattctgaggagtcatttttgcgacagaagtca
agaaatagtagcgatgattctgtgttggaggaagaaacttcaaattcaaatggctttgga
gtttatatttatgaacaagatggttcaagaaacacaatgcatgatgaggatgataactat
caaagtcaatatgaaaatgcatttgcatcaagaaacaattttgaaaatgcatgcgctagt
gtgttgagcgctgcaaacaatgatgaaggtgtagatgattttgaaacaaacatcattacg
aaaggaggaaatgtagtcaatgggataaaccatcattctgatgaaatggcccaacacaaa
tgctctcctgaattgacaattaaaggaagtgcaaaggctaaaaagcaatcccatccttct
tcaaaggtcaaatgttctaaatcaccaaagtcaacatcaaagacgtcaatagatttttgt
gtaccggaaactgagaagaaagcgaagaaaattccagacgaaccaaaagttgctggaaat
agaagtactatccctttacatggtatcgacggagtttcaagcactggccttatgaaaatg
atgggtttaaggaaatcaacaaaacatactgcactagcctcctcagaaggcaatggagta
cggtgcaaaaaggcaaaaaatataaagatgttgtttccttatgatgaatttgtaaagatt
ttccagagtgaagtctttggtgtatggccgaggggccttgtaaattgtgggaacagttgc
tatgccaatgctgtattgcagtgcttaacgtctacaaagcctcttgtcgtttatttgctt
tatggatcacattcaaaatcctgtatttccattatctctcaatcttttcacttaaacaat
aatgtcaatttgcttaaaatgcattttttaatagaaaattgtcttctttttcatctaggt
tgttcaaaagattggtgtttaatgtgtgagttagagcagcacatgatggttttgagagaa
aatggagctcctttatctcctagtaggatactttggcatatgcggagcattaattgccac
atgggtgatggaagtcaagaagatgcacatgaatttttaaggcttctagttgcatcgatg
caatctatatgtttggatggacttggtggtgagaaaagggttgatcctagattacaagaa
acaactttcatacaacatacttttggtggtcgtcttcaatccaaggttaagtgtttgaat
tgtagtcatgagtcagaaaggtatgagaacattatggacttaacgttggagatattgggt
tgggttgagtcactcgaagatgcactggctcagtttacttcccctgaagatttggacgga
gataatatgtaccggtgtggaaggtgcactgcatatgttcgagctagaaagcaactgagc
atacatgaggcccctaacatcttgaccattgttttaaagaggtttcaggaaggaagatat
gggaaaattaacaagtgcataacgtttcctgaaatgctagatatgattccttttatgact
gggacgggcgatattcctccattatacgccctttatgctgttgttgtgcacctcgacaca
ctaaatgcatctttctctggacattatgtttcgtacgtaaaagatctacaaggcaattgg
ttcagggtagatgacactgaggttcagccagtactcgtcaatcaagtgatgtcagaagga
gcatatatcttattctacacaaggtcgtatccccgtccacaggtagaattcactgggaaa
gccgcaccacaatcagtgtccgattcatcaaagcaccatccattagaaatgcagaagcct
tctaaacccggacatagccgacatgtcagtcaaagttttgtctctgagccttcacacaat
gccaggccagaaatccccactcaccttatcgacacctctaatggctttcttaaaagaagc
accaatcgaaatgtccatccagtaatacaaacttacgcggaaaacatcaggcacgagttt
tcagatgcgacatcaagtgactggtccattttcacaagctcggatgaagcttctttcact
actgagagtactagagactctttcagtactgtagactatggtgattcttcttccaacatg
gatccaatttcatctctcttcaattacacaccagaaaacaactatatgaagatttcacat
agtaggccactaacaaggttcttaccgaaaaagggtcatatcgaaagagtgcagaaaaca
actatatgggaatcctaa
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