Trifolium pratense (red clover): 123895027
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Entry
123895027 CDS
T08949
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03030
DNA replication
tpra03410
Base excision repair
tpra03420
Nucleotide excision repair
tpra03430
Mismatch repair
tpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123895027
03410 Base excision repair
123895027
03420 Nucleotide excision repair
123895027
03430 Mismatch repair
123895027
03440 Homologous recombination
123895027
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123895027
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123895027
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123895027
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123895027
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
123895027
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
123895027
MMR (mismatch excision repair)
DNA polymerase delta complex
123895027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
123895027
NCBI-ProteinID:
XP_045801168
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Position
LG7:42339786..42344942
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AA seq
518 aa
AA seq
DB search
MSQIETLSLIHEIESLISDQLQVVSYKWLSRNYQISSDEAKRLLHEFVEKHEGGLEVVYA
LSGWLKSTHRSYHIRLVTGPKLAEAQHDFDGNCSVQVYSVQPSIPKDPAVLWNAEFIQAE
ELSKQPSSVDNCLRDNRFCGISNTFVRRNVDGQPAVSATPQIKSVVGLGSTKSNVVQPPP
KNIAHNSIAKVDLKSQNVVKDFKSESNGTGNAVVHENINKPTAEKEKSLLLPTGKKKVQA
DKNGSATGGSLASFWGRPSAKPKPCSVPAENSNTISNPSEATENAQTCANEAEADSDDDN
QGVPLRRSSNRKRRVVFDLSDEDEDVVNLASPEVPSKQLSQDSRQNDKNLLEKEPLNFDL
PVEIKPLVKEERVEKKVFQPPREDLSVITKCTTAGKSSTEKLHSSAPEICVKKDSVKMAA
PDSTKRRKVMKTRIDERGREVTDVFWEGEEIEAKKADMVTAKKTDTVAKKADNNGSTNAV
NSAPATKKPPATGKGGSKKALNSKDPKQGNLLSFFKKV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaatcgaaaccctatctctgattcacgagatcgaatctctaatctccgatcaa
cttcaagtggtttcatacaagtggctgagtcgcaattatcagatatcatctgatgaagca
aagaggttgcttcatgaatttgttgaaaaacatgagggtgggttggaagtggtgtatgct
ttgtctggctggttaaagagtactcatcgtagttaccacataaggcttgttactggacca
aagctagcagaagcacagcacgactttgatggaaattgctcagtccaggtatatagtgtg
caacccagcattccaaaggatccagctgtgctttggaatgcagaattcattcaagcagaa
gagctctccaagcagccttcctctgttgataattgcttgagagacaataggttctgtgga
atctctaacacttttgtacgaagaaacgtggatggccaaccggcagtttctgccactcca
caaataaaatctgtagtaggtttgggatcaacaaagagtaacgttgttcaaccacctccg
aaaaacatagcacacaattctattgcgaaagttgatctcaaatcacagaatgtggtgaaa
gatttcaagagtgaaagcaatggtacagggaatgctgtagttcatgaaaacatcaataaa
cctactgcagagaaagaaaagtcccttctcttgcccacaggaaaaaagaaagttcaagct
gataaaaatggctctgctaccggcggttcgttggcaagcttttggggtcgtccatctgca
aaacccaagccatgctctgtgccagcagaaaatagcaacacgatttcgaatccttctgaa
gctactgaaaatgcccaaacttgtgctaatgaagcagaagcagacagtgatgatgacaat
caaggtgtccccttaagaagatcatccaataggaaaaggagggttgtctttgatttgtca
gatgaagatgaagatgtcgtcaatttagcatcacctgaggtccctagtaaacagttgtct
caagattccagacaaaatgacaaaaacctgttagagaaagaacctttgaattttgatttg
ccggtagaaattaaaccattggttaaggaagagagagttgagaaaaaagttttccaacca
ccaagagaagatttatcagttatcaccaagtgcacaactgctgggaaatcatctactgag
aagttgcacagtagtgctccagaaatttgtgtaaaaaaggatagtgtaaaaatggccgct
ccagattcaactaagaggagaaaagtgatgaagaccaggattgatgaacgaggaagagaa
gtgactgatgtattctgggagggggaggagatagaggcaaagaaagctgatatggttaca
gcaaagaagactgatacggttgcaaagaaagcggacaataatggatctaccaatgctgtc
aacagtgcaccggcaactaagaagccaccagctactggaaaaggaggaagcaagaaagca
ttaaattcaaaagatcccaaacagggcaatcttctttcatttttcaagaaagtatga
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