Trifolium pratense (red clover): 123895127
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Entry
123895127 CDS
T08949
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123895127
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123895127
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123895127
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
123895127
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-C3HC4_2
IBR
zf-C3HC4
Rtf2
zf-MIZ
zf-RING_2
zf-ANAPC11
zf-rbx1
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
123895127
NCBI-ProteinID:
XP_045801299
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Position
LG7:complement(43478163..43483994)
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AA seq
284 aa
AA seq
DB search
MNRCISNFDFHVTLKPNPHISLQNSPFAELRHHQSIGTTMASTSHGGTSGRIKNLTSTFG
SDIQPLVAEIRTTVGVMKDIAVQLEKDNLPDKVKETEDAVVELVGLSEHSVHFSSAVQAF
GNRYKPGEQLTDFHKVLEDEVLQFRANRNSDVQRNPLVRQFKEAVWKVHHSGQPMPGEEE
EDIVMTSTQTNILNFSCPVSGKPITELEEPVRSMQCRHIYEKKAIVQYIKSMNNRSQCPI
PGCPKAVDVNVLVQDPSLAVDIDELRRTSNKETNVEDFTMLDED
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatgcatttcaaatttcgattttcacgtcacgcttaaacctaaccctcatatc
tccctccaaaattcccctttcgcggaactccgacaccaccaatccatcggaacaaccatg
gcgtcaacttcacacggcggcacttctggtcgtataaagaacttaacttccaccttcggc
tccgatattcaaccactcgttgcggaaatccgaacaacagtgggtgtgatgaaggatatt
gcagttcaattggaaaaagacaatcttccagacaaggtgaaggagacggaagatgctgtt
gttgagttagttggcttatctgaacacagtgtgcatttttcatctgctgttcaagctttt
ggtaatagatacaagcctggagaacagttgactgattttcataaggtgttggaagatgaa
gttttgcagtttagggccaatcgaaattcagatgttcaaagaaatcctttagtgcgccaa
tttaaggaagctgtatggaaagtgcatcacagcggacagccaatgcctggtgaagaggag
gaagacattgtaatgactagtacccaaactaatattttgaattttagttgtccagtgagt
ggaaagcctattactgagcttgaagaaccagttcgcagcatgcaatgtaggcacatttat
gaaaagaaagcgatagtgcaatatatcaagtcaatgaataaccgttctcaatgcccaata
ccgggttgtccaaaagcggtggatgtaaatgtgctggtacaggatccgtcgttggctgtg
gatattgatgaattgcgaagaacgagcaacaaagaaactaatgtagaagatttcaccatg
cttgatgaagattaa
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