KEGG   Trifolium pratense (red clover): 123895161
Entry
123895161         CDS       T08949                                 
Name
(RefSeq) protein SPA1-RELATED 3 isoform X1
  KO
K26557  protein SPA1-related 3/4
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    123895161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tpra04121]
    123895161
Ubiquitin system [BR:tpra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    123895161
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Pkinase Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_Vps41 PK_Tyr_Ser-Thr Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th WD40_like NBCH_WD40 WDR54
Other DBs
NCBI-GeneID: 123895161
NCBI-ProteinID: XP_045801342
LinkDB
Position
LG7:complement(43856247..43861846)
AA seq 877 aa
MEGHSESSRALNSSGVSDRNQRENPFSGEGSQDSRFRKERDWIHGLQGDQNKNLGGFCED
EVENENDPFFGSVEWGDISLRQWLDKPDRSVDFFECLHIFRQIVEIVNAAHCQGVVVHNV
RPSCFVMSSFNHISFIESASCSDTGSDSLGDGMNNDQVVEVKTPTSHCPHDMHHQQSLGS
EDFMPAAKITTDARSDSSCMLSSAVYAARASLIGETEENKMKDMRKDEEVEGKKQSFPMK
QILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPPSSRDEKSRTMSSLRHRVLP
PQLLLKWPKEASFCLWLLHPDPSSRPTLGELLQSEFLNEQRDDMEEREAAIELRQKIEDQ
ELLLEFLSLLKQRKQEVAERLQHTISFLCSDIEEVTKKQTRFKEISGAERGSDDCLTSTF
PSTTVVDGEDSTCLGTRKRVRQGMHIDECDDNMENDQKSQGSFLSKSSRLMKNFKKLESA
YFLTRCKPTYSSGRPSIRHSPIAPNDGRGSVVLNERSFINNLALKEQGRDSASAWINPFL
EGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTII
NEDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQVLSEMREHER
RVWSIDFSSADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFPLDSARYLAFG
SADHRIYYYDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVSASTDNTLKLWDLSTCSSRV
IDSPIQSFTGHTNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALQFKFQNTDPISG
HEVDDAAQFVSSVCWRGQSPTLIAANSTGNVKILEMV
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggagggtcattctgagagttctagggctttgaatagttctggagtctcagataggaac
caaagggaaaaccctttttcgggcgagggttcgcaagattctaggtttagaaaggaaaga
gattggattcatggtttgcaaggtgatcaaaacaaaaacttaggtggattttgtgaggat
gaagttgagaatgagaatgaccctttctttggttcagtagaatggggtgatattagtttg
aggcaatggttggataaacccgatcgttcggtagatttcttcgaatgcttgcatatattt
aggcaaatagtagagattgttaatgcggcacattgtcaaggtgttgtagttcataatgtg
aggccttcttgctttgtcatgtcgtctttcaaccatatctcgtttatcgaatcagcttct
tgttcggatactggttcagattctttaggagatggaatgaacaatgaccaagttgttgag
gttaaaactccgacatctcactgtcctcatgatatgcatcatcagcagagtttaggaagt
gaagattttatgcctgctgcgaagattacaaccgatgctcggtctgattctagttgcatg
ctgtcaagtgctgtctatgcagctcgtgcgtcgttaataggagaaacggaagaaaataaa
atgaaagatatgaggaaggatgaagaagtggaaggaaagaagcaatcgtttccgatgaaa
cagatacttctaatggagatgagttggtacactagtcctgaagaggttgcaggtactcct
agttcatgtgcttcggatgtttacagattggggattcttcttttcgagctattctgtcca
ccgagctcaagagacgagaaaagtagaacaatgtctagtcttagacatagagttcttcct
ccacagttacttctaaagtggcctaaggaagcttcattttgcttatggttactacatcct
gaccctagcagtcgtccaacactaggcgagttgttgcagagcgagttccttaatgaacag
cgtgatgatatggaagaacgtgaagcagcaatagagcttagacaaaagatagaagatcag
gagttgttactcgaattcctttcattacttaaacaaagaaaacaggaagttgctgaaagg
ttgcaacacactatctcttttctgtgttcagatatcgaagaagtgaccaagaagcaaaca
agatttaaagagatttccggtgctgaacgagggagtgatgattgtttgacgtcaactttt
ccgtccacgacagttgttgatggcgaggattccacttgtttaggaactagaaaacgagtc
agacaagggatgcatattgatgaatgtgatgataacatggagaatgatcagaaaagtcag
ggaagttttctttcaaaaagttcacggctaatgaaaaacttcaagaaacttgagtcagca
tactttttaacacgatgcaaaccaacctattcctcggggagaccgtcaattagacattca
cctatagcaccaaatgatgggagagggtctgtcgtcttgaacgaaagaagtttcattaat
aacttggcgttgaaagagcaaggaagagacagcgcaagtgcttggataaatccatttctc
gagggtttgtgcaagtacttgtctttcagtaagctcaaagtaaaagctgacttgaagcaa
ggagatcttttgcattcttccaacctagtatgctcgctaagtttcgatcgtgacggagaa
ttttttgctaccgccggtgtgaataagaaaatcaaaatatttgaatgtgatacaatcata
aatgaggatcgtgatatccactatccggtagtggagatggcttgcaggtcaaagttgagc
agtttatgttggaatacatacatcaaaagtcaaattgcttcaagtaacttcgaaggtgtt
gtacagttatgggatgttacgagaagtcaagtactatctgaaatgagggagcacgagcgg
cgagtgtggtccattgatttctcatcagcagatccgacaatgttggcgagtggaagcgac
gacggttccgttaagctatggagtatcaatcagggagttagtgtcggtaccatcaaaaca
aaggcgaatgtatgctgcgttcagtttcctctcgattctgctcgttatcttgcgtttggt
tcggcagatcaccggatatattactatgatctacgcaacttaagagtgccgctttgtact
ttggttggacataataagaccgtgagctacatcaagtttgtagacaatgtcaaccttgtc
tcagcatccacggacaatactttgaagctttgggatttgtctacttgttcatctcgggtt
attgactcaccgattcaatcgttcactggtcacacaaatgttaagaacttcgtgggatta
tcggtatctgatggttatatcgctactggttcagagacaaacgaggtgttcatataccac
aaggccttccctatgccagcattgcaattcaagtttcaaaacacagatccaatttctggt
cacgaagtggacgatgccgcgcagtttgtttcctcagtttgttggcgaggtcagtcgcca
accttaatcgccgcaaattccacgggaaatgtcaagattctcgagatggtttga

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