KEGG   Trifolium pratense (red clover): 123895260
Entry
123895260         CDS       T08949                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tpra03036]
    123895260
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123895260
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123895260
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     123895260
SSDB
Motif
Pfam: MMS19_N MMS19_C TOR1L1_N HEAT UTP20_N HEAT_EF3_N DUF5006 HEAT_EZ
Other DBs
NCBI-GeneID: 123895260
NCBI-ProteinID: XP_045801471
LinkDB
Position
LG7:56712958..56723721
AA seq 1141 aa
MAETTQLTRHIESYVDSSSTPTHQVASLDAIGVLIKTNALTLEALVRELDMYLTSTDAVI
RSRGILLLAEVLTRIQSKPLNGETIHSLVGFFKEKMVDWKAVRGAILGCLALIRRKSGVG
MVTGSDAKAIARSFLQNLQVQSLGQYDRKICFELLDYLLEHYADTVASLEEDLIFGTCEA
IDTEKDPECLMVAFHIVDSLARLYPDPSGPLASFARDLFDILAPYFPIHFTHPTSGDTHV
QRDDLSRTLMSAFSSTPLFEPFAIPLLLEKLSSSLQSAKIDSLKYLRVCSSKYGAERIAK
YAGAIWSALKDTLYTYLGEPAFSSTLASIDGIDFPKDEIVIEALSLLQQLVVQNSGQLVT
LIIDDEDVNFIINTIASYEMYDTISVQEKKKLHAIGRILYITAKTSIPSCNALFQSLFLR
MMDNLGFSVSNVDGLQSGGIFDSQRVKFGFLYICIELLAGCRELVILSEEKQGTYCTILH
SFSNVLFNAFGSVLAVSADRCPFDPDIYIGVKGLQILAMFHLDVFPIPKSTFENILKKFM
SIIIDDFNKTVLWNATLKALFHIGSFVQNISESEKAMSYRSFVVDKTMELLSLHDIALPF
SLKVEALSDIGMTGMKNMLTILQGLEGTIFANLSEVYACRNLTSSEIAVQLLECYSCKLL
PWINENGGAEEFVVQFAVEIWSQAGNSMDSNAPSEEKGLLDAMMKAMKVSVGCCSVESQN
VIIQKAYSMLSTHTSFQLNDVERLPLTFGKYDISPRDEGILLLFTSVIIALRPKTHIPNI
RGLLHLFILTLLRGVVPVAQALGSMFNKLISKSSVVEKSGELTLEEALDVIFNTKIVFSC
NNMLQRCNRSSNGSEMALTDLCLSITNDRSLQTNAICGLSWIGKGLLLRGHEKIKDITMI
FIECLISDTKISLPLIEGSHENNEEQKWDPLARKCAAEAFHVLMSDAEVCLNKKFHATIR
PLYKQRFFSSMIPIFQQLISRSDSSLSRCLLLRAFAHVMSDTPLIVILNEAKKLIPILLD
CLSMLTKDIQDKDILYGLLLVLSGMLTEKNGQEAVIENAHIIINCLIKLVDYPHKTLVRE
TAIQCLVALSELPHARIYPLRTQVLRALPKCLDDTKRSVRHEAVKCRQAWASIASSRSIR
F
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggcggaaaccactcaattgactcgtcacattgaatcatacgttgactcatcttccact
ccaactcaccaggttgcaagcttggacgcaattggagtgttgataaagaccaatgcttta
actctagaagcacttgttagagagttggatatgtatttgacttcgacagatgcagttatt
cgatcaagaggaattcttcttctggcagaggtgcttactcgtattcaatcaaaacctctg
aacggtgaaactatacatagcttggttgggttctttaaggaaaaaatggtagattggaaa
gcagtacgaggtgcaattctgggttgcttggcactgataaggaggaaaagtggtgtgggt
atggtaacgggtagtgatgccaaagccattgctcgatcttttttacaaaacttgcaagtt
caatctttaggacagtatgacaggaagatatgctttgaactgcttgattacctgctagaa
cattatgccgatacagttgcttcattggaggaggatcttatttttggaacttgtgaagcc
atagacacagaaaaggatccagaatgtttaatggttgcgtttcatattgttgattctttg
gcacgactatatcctgatccatctggtccacttgcaagctttgctagagatctttttgat
attttagcaccttattttcctattcactttacacatccaaccagcggggacactcatgtg
caaagagatgacctgtcaaggactctgatgtctgcattctcttctacacctctttttgag
ccatttgcaattcctctgcttcttgagaaactttcttcttcactacagtcagcaaagatt
gattccttaaaatatcttcgagtgtgctcctccaaatatggtgcagagagaatcgcaaaa
tatgctggggctatttggtctgcattgaaagacaccttatatacttatttaggggagcca
gctttttcttctaccctagcatccatagatggtattgactttccaaaggatgaaattgta
attgaagctctgtccctacttcaacagcttgtggtgcaaaatagcggtcaattagttacc
ttgataattgatgatgaggatgtgaactttataatcaacaccattgcctcttatgagatg
tacgacacgatttctgtgcaagaaaagaagaaactacatgctattggtcgcattctctat
attactgccaagacgtccattccttcctgcaatgctttgtttcaaagtcttttcttaaga
atgatggataatttgggattttctgttagtaacgttgatggcttgcaaagtggtggtatt
tttgactcacaacgtgttaagttcggattcctttatatctgcatagaactactcgcagga
tgcagggaattagttattttatctgaggaaaagcaggggacatattgcaccatacttcat
agtttctcaaatgtgttatttaatgcctttggttcagtcttagctgtaagtgctgacagg
tgcccctttgatcctgatatatacattggagtgaagggcttgcagattctggcaatgttt
catttagatgtttttccaataccaaaatcaacatttgagaatattttgaagaaattcatg
tcaattataatagacgatttcaacaaaacagtactatggaatgccacattgaaagcatta
tttcatattggctcgtttgttcaaaacatcagcgagtctgagaaagctatgagctacagg
agttttgttgtagacaaaactatggaactgctttctctccatgatattgctctgccattt
tcactcaaagtagaagcattatctgatataggcatgactggcatgaaaaatatgctaaca
attcttcaagggctggaaggaaccatatttgccaatctatcagaggtctatgcctgtaga
aatttgacgtcttctgaaattgctgttcagcttttggagtgctattcttgcaagctactt
ccatggatcaatgaaaatggaggtgcagaggagtttgtagtgcaatttgctgtggagatt
tggagccaagcaggaaattccatggattctaatgctccatctgaggaaaagggtcttctt
gatgcaatgatgaaagcgatgaaagtttctgtcgggtgttgctctgtagagagtcaaaat
gttataattcaaaaagcttacagtatgttatcgacacataccagctttcagcttaatgat
gtagaaagattgccattaacttttggaaaatatgatatttcccctagggatgaagggata
cttctattatttacatcagtaattattgcacttcgccccaaaacacacattccaaatatc
agaggacttctgcatctttttatacttaccctccttaggggcgttgttccagttgcacag
gctttgggttctatgttcaacaaactcatttcaaaatccagtgttgtagagaagtctggc
gaacttaccttggaagaagctcttgatgttatattcaacacaaaaatagtgttttcttgt
aataatatgttgcagagatgtaatagatcaagtaatggaagtgaaatggctcttactgat
ttatgcctcagcatcacaaatgatagatcgcttcaaaccaatgccatttgtgggctctca
tggattggaaaaggtttgctgttgcgtggtcatgaaaagattaaagacatcactatgata
tttattgagtgcttaatatcagacacaaagatttcattgcctttgattgaaggttcacat
gaaaataatgaagagcagaaatgggatcctttggcaaggaaatgtgctgcggaagctttt
cacgttcttatgagtgatgctgaagtttgtttgaacaaaaaatttcatgccacaatacgg
cctctatataagcagaggtttttctcttctatgattcccatctttcagcagttgatctca
agatctgattcatcactgtccagatgtttactgttacgagcttttgcacatgtcatgtct
gacactccactgattgttatactgaatgaagctaaaaagctcataccaattcttctggat
tgcttgtctatgttaacaaaagatatccaagataaagatatcttgtatggtctgttgcta
gttttatctgggatgttgacagagaaaaatggacaagaagctgtcattgagaatgcacat
attatcatcaattgtctaattaagctcgtggactaccctcataagacgcttgttcgggag
acggctattcaatgtcttgttgcattgtctgagcttccccatgcgcgtatttacccattg
agaacacaggttctacgagcactaccaaagtgtcttgatgatacaaagagatctgttcgc
catgaagctgtcaaatgtcggcaagcatgggcatcaattgcatcatccaggagtattcgt
ttctga

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