KEGG   Trifolium pratense (red clover): 123895477
Entry
123895477         CDS       T08949                                 
Name
(RefSeq) DNA repair protein RAD5A-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123895477
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    123895477
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 ResIII zf-RING_4 zf-ANAPC11 UBA_Rad5 MEIOC NRho
Other DBs
NCBI-GeneID: 123895477
NCBI-ProteinID: XP_045801794
LinkDB
Position
LG7:47135293..47144987
AA seq 1008 aa
MGSKVTDPNLSTVRSIVGSEFSDMDIIRALHMAKNDVTAAINIIFDTNTPKFKPTRIISK
QQVSSPKSSPRAVTTSSKKNNADVENKKCSVATELDSESVDWWFVGSGDVAGLSTCKGRS
IKSGDKVIFKFPTKKVSVSPSPGKGFGRAASCSEIVRFSNEQDWEIGRIPNEWARCLLPL
VRDNKVRVEGKCEFAPNVLGIMDNINLSISVFINRSMFVKHHHVSLKDATSSTDESVFHP
LPALFRLLGLSPFKKAELTPGDFYSNKRPFSQTVTSLHAKSERPSQNGHENENEDPVSEF
DLDNIVGVASSSELEEMDPPENLLCELRPYQKQALHWMIQMEKGRSRDETTTTLHPCWEA
YRLADKRELVVYLNAFSGEATTEFPSTLEMARGGILADAMGLGKTVMTISLLIAHSGRGG
SLGSQPATQSFIEGGDTGTVPKFSIIPKKATKFTGFDKLTKQNTSLSSGGNLIICPMTLL
GQWKAEIETHVHPGSLSLYVHYGQSRPKDAKSLAQCDVVITTYGTMASEFSSENAENNGG
LFSIRWFRVVLDEAHTIKSSKSQVSMAASALIADNRWCLTGTPIQNNLEDVYSLLRFLRI
EPWGHWAWWNKLIQKPFEGGDERGLKLVQSILKPIMLRRTKHSTDREGKPILVLPPADMQ
IIYCDPTEAEKDFYEALFKRSKVKFDKFVEQGRILHNYASILELLLRLRQCCDHPFLVMS
RGDTQEFSDLSKLAKRFLRGTGNASEGEVKDAVSRAYVEEVVEELRNGEQGECPICLEAF
EDAVLTPCAHRLCRECLLASWRNSSSGLCPVCRKTISKQDLITAPTESRFQVDIEKNWVE
SCKITGLLNELENLRSSGSKSIVFSQWTAFLDLLQIPFTRNKISFVRLDGTLNLQQREKV
IKQFSEDSDIQVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKV
AIKRFIVKGTVEQRMEAVQARKQRMISGALTDQEVRSARIEELKMLFT
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgggaagcaaggtcaccgatcccaatctctccaccgtccgatccatcgtcggttccgaa
ttctccgacatggacatcatcagagctctacacatggccaaaaacgacgtcactgccgcc
attaacatcatcttcgataccaatactcctaaattcaaacccactcgcataattagtaaa
caacaagtttcttctccgaaatcatctccacgcgccgtcaccaccagctccaagaaaaac
aacgctgatgtagaaaataagaaatgttccgttgcgactgagttggattcagaatccgtt
gattggtggttcgttggttccggtgatgtggcagggctgtcgacgtgtaaaggaaggagt
ataaagtctggtgataaagttattttcaaatttccaactaaaaaggtttctgtttcgccg
tctccgggtaagggttttggtcgagcagcgagttgttcggagatagttcgattttctaat
gaacaagattgggagattggtagaataccgaatgaatgggctcgatgtttgttgccgctg
gtgcgagataataaggttagggttgaagggaaatgtgaatttgcgcctaatgttttgggc
atcatggataatatcaatttgtcgatcagtgttttcatcaataggtcaatgtttgttaag
catcaccatgtttctcttaaggatgctacaagttcaaccgatgaatcagtgtttcatcct
cttccagccctgtttcgattgcttggcctgagccctttcaagaaggcagagttaactcct
ggtgatttctattccaacaagcgccctttcagtcaaacggtaacatcactacatgccaag
tctgagcgtccttctcaaaatggtcatgagaatgaaaatgaggaccctgtttccgagttt
gatcttgataacattgttggtgttgcatcaagctcagagttagaggaaatggacccccct
gaaaatcttctttgtgaactgcgaccctatcaaaaacaggctcttcattggatgattcag
atggagaagggacggtcaagggacgagactacaacaacccttcatccatgttgggaggca
tatcgcctggctgacaagagggagcttgttgtttatttaaatgcattttctggtgaagcc
acaacggaatttcctagcaccctagaaatggccagaggaggaattttggcagatgctatg
ggacttggaaagactgtaatgaccatatcccttctcattgcccattccggaaggggtgga
tcgttaggcagtcaacccgcaactcagtcatttattgaaggtggtgatactggtacagtt
cccaaattttcaatcattccaaagaaggcaaccaaatttactggatttgataaactgaca
aagcaaaacacttctttatcaagtggtggcaacttgataatatgtcccatgactcttctt
gggcagtggaaggcagagattgaaactcatgtgcaccctgggtccctgtctctatatgtt
cattacggacaaagtaggcccaaagatgcaaaaagtctagctcaatgcgatgttgtaatt
actacatatggaactatggcctctgaattttccagtgagaatgcagagaataatggtgga
ctcttctccattcgttggttcagagtggttcttgacgaggcacatactataaaatcttct
aaaagccaagtttctatggcagcatctgctctaattgctgacaatcgctggtgtcttact
gggactccaatccagaacaatcttgaggatgtttacagccttcttcgctttctgagaata
gagccttggggtcattgggcctggtggaacaagcttattcagaaaccatttgagggtggt
gatgagagaggattgaaattagttcagtccattttgaagcctatcatgttgaggagaacc
aagcatagcacagatcgagagggcaagcctatactagttctccctcccgccgatatgcag
ataatttactgtgatcccacagaagctgaaaaggacttctatgaggccctattcaaaaga
tctaaggtaaagtttgataagtttgttgagcaaggacgcattcttcataattatgcttca
atactagagctacttttacgtcttcggcaatgttgtgaccatccatttctcgtaatgagt
cgaggtgatactcaagaattttccgatctaagcaaactagctaagcgcttccttagagga
accggtaatgcttcagaaggtgaagtaaaagatgcagtctcacgagcttatgttgaagaa
gttgtggaagagttgcgtaatggagagcagggagagtgtccaatatgtcttgaagcattt
gaagatgccgtgttgacaccatgtgctcaccgcctttgccgggaatgcctcttggcaagt
tggcgaaattctagctctggcttatgtcctgtttgtaggaaaacaatcagcaagcaggac
cttatcaccgcccctactgagagtcgatttcaggttgatatcgagaagaactgggtagag
tcatgcaagataactggtcttttgaatgaacttgaaaatcttcgctcatcgggatctaag
agcatagtttttagccagtggactgcttttctagacctcttgcagattccctttactagg
aataaaatatcatttgttcgacttgatgggacattgaatttgcagcagcgtgaaaaagtt
atcaaacaattctcagaagacagcgacatacaggtgttgttgatgtcactaaaagctggc
ggagtgggtataaatctaacagcagcttccaatgcttttgtcatggacccatggtggaat
ccagctgttgaagaacaagctgttatgcgcattcatcgcattggacaaacaaagaaggtg
gccatcaaacggtttattgtgaaggggacagtagagcagagaatggaggcagtgcaagca
cgcaaacaacgaatgatttctggtgccttgactgaccaggaagttcgatctgcacggatt
gaggagttgaagatgctttttacatag

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