Trifolium pratense (red clover): 123895620
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Entry
123895620 CDS
T08949
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123895620
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123895620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_IFT140_1st
DUF5888
WDR54
Motif
Other DBs
NCBI-GeneID:
123895620
NCBI-ProteinID:
XP_045802034
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All DBs
Position
LG7:complement(34676193..34682089)
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AA seq
484 aa
AA seq
DB search
MSQLNKDISDCMNDGSGSSNNESSASGKDGEGTSYLVHEVAQMTKLRSSPHENLSRVFPG
RMKLPASTLRMLVGRECNYSGRGKFSAADGCHVLSRYLPTKGPWIVDRMGSRAYVSQFSD
DGSLFVAGFQGSHIRIYDVEKDWKIKKDISARNLRWTITDTSLSPDRQYLVYASMSPIIH
IVNAGSATTESVANVTEVHYGLNFSSDNDGDEFGIFSIKFSTDGRELVSGTSDSSICVYD
LGADKLSLRIPAHLSDVNTVCFADESGHLIYSGSDDSFCKVWDRRCFVSKGQPAGILMGH
LEGITFINSRGDGRYLISNGKDQTTKLWDIRKMSSNAVNMGLGDDEWDYRWMDYPKYARN
LRHSHDQSLATYQGHSVLRTLVRCYFSPSYSTGQKYIYTGSSDASVYIYDLVSGEQVAKL
DHHEAPVRDCSWHPMYPMLISSSWDGDIVKWEFPGNGQPPAPPPTRRLGGSRIRGISWMR
NMYR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttgaacaaagatataagtgattgtatgaatgatggtagtggcagtagtaat
aatgaatcaagtgcaagtggaaaggatggagaagggacaagttatcttgttcatgaagtt
gcacagatgacaaaacttaggtcaagtccacatgagaatttgagtcgcgtttttcctggt
aggatgaaattacctgcatcaactttaagaatgttagtagggagagaatgtaattattct
ggaagagggaaattttcagcagcagatggatgtcacgtgttaagccgatatttgcctact
aaaggtccttggattgtggaccggatgggaagtcgcgcttatgtttcgcagttttccgat
gatggttctctttttgtagctggatttcagggaagccacatcaggatctatgatgttgaa
aaggattggaaaattaagaaagacatctctgctagaaacttacggtggacaattactgat
acatctctctcacccgatcgacaatatcttgtttatgctagtatgtcaccaattatccat
attgtcaatgcaggatcggctacaacagagtccgtagcaaatgtgacagaagttcattat
ggattgaatttctcttctgacaatgatggtgatgaatttgggattttctctatcaaattt
tcaacggatgggcgagagcttgtgtctggaactagtgatagttcgatatgtgtgtatgat
ctcggagcggataagcttagccttagaatccctgctcacctgtctgatgttaacactgtc
tgctttgccgatgaatctggtcatctcatatactccggaagtgatgatagtttctgcaag
gtgtgggataggcgttgctttgtctcgaaaggacaaccagctggtatcctgatgggacat
ttagaaggcattacgttcattaatagtcgtggtgatggccgctatttaatttctaatgga
aaagatcaaactaccaaattatgggacataaggaagatgtcttctaatgccgtgaatatg
ggacttggagatgacgagtgggactatcggtggatggactatcctaaatatgcaagaaat
ttaaggcattcccatgaccagtcattggcaacatatcaaggccactcagtgttgcgaact
ctagttcgatgttatttctcaccatcatatagcactggtcaaaaatacatttacaccgga
tctagcgatgcttctgtctacatatatgatctggtgagtggagaacaagttgcaaaactt
gatcatcatgaagcaccagtaagagattgcagttggcatcctatgtatccaatgttgata
tcatcatcatgggatggtgacattgttaagtgggaatttcctggaaatggccaaccacct
gctcctcctccaactagaagattaggtggaagtcgtattagaggcatatcttggatgagg
aacatgtatcgttag
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