Trifolium pratense (red clover): 123896393
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Entry
123896393 CDS
T08949
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123896393
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123896393
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
123896393
Protein phosphatases and associated proteins [BR:
tpra01009
]
HAD phosphatases
Fcp/Scp phosphatases
123896393
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123896393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
123896393
NCBI-ProteinID:
XP_045802741
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All DBs
Position
LG7:complement(38635939..38640104)
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AA seq
513 aa
AA seq
DB search
MHLPESVRARNVVSRKEKKSLEFCDPVRVKMSGEENSPEDSSGEFADYIELVVDANASSA
DSLSDMEVESQDQSESFRGLHFRSTNKEAKRKLRRLLQKEARETEASTSEGSMIQSAHAL
SSMEVDGCLHPGSMEGICITCGQNLPGKYGLTVGYMQKIWIVVLTACRYFRIPGLMVLID
LDQKGLRLEGDEMSRLSSRTMKSLLNHRKLCLVLDLDHTLLNTTSLFWLTSEEMALNTNA
GSLQDVSKGSLFISESMNLMTKLRPFVRTFLKEASEMFEMYIYTMGDRPYAIQMAKLLDP
QEEYFKDKIISRDDGTKKDKKDLDIVMGTENAILILDDKEEVWPNHNDNLMLMERYLFFK
SSCQEFGYKFKSLTELQSDEDETNGALSKILKVLKQIHSAFFDELQGDLIDRDVRQVLSS
LRGEVLSGCVIVFSHNFRSDLRPLKNMARRLGATCYTNPDATVTHVVATEFVTKETRWAT
QHNKFLVSRHWLEASHIFFQKQPEENFILRQRQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgccagaatctgtgagagctcgtaacgttgtttcacgaaaagaaaagaaatct
ctagaattttgcgatcctgtaagagtaaagatgagtggtgaggaaaattctcctgaagat
tcatctggtgaatttgctgattatattgagcttgtagtagatgcaaatgcaagttcagcc
gactcattgtcagatatggaagttgaaagccaagatcagtcagagagtttcaggggtcta
cacttcagaagcaccaataaggaagcaaaaaggaaactgaggcgtctacttcagaaggaa
gcaagggaaactgaggcgtctacttcagaaggaagcatgattcaatctgcacatgcattg
tcatccatggaggtagatggatgtttgcaccctggctcaatggaaggcatatgtataact
tgtgggcaaaatttgcctgggaaatatggtttgacagttgggtacatgcaaaagatttgg
atagttgttcttaccgcatgtcgctattttcgaattcctggtttaatggttcttatcgat
cttgaccaaaaaggactaagacttgaaggcgacgaaatgtctagattgagcagcagaacc
atgaagagtttattaaatcatagaaagctttgtttggttctggacctagatcacacactg
ctaaataccacttcccttttttggttgacctcagaagaaatggctttaaacaccaatgca
ggttctctacaagatgtctctaaaggtagcctcttcatatcggagagtatgaatttaatg
accaagttgaggccctttgtccgcacatttcttaaagaagcaagtgaaatgtttgaaatg
tacatctacaccatgggtgataggccgtatgcaatacaaatggccaagctgcttgatcct
caagaggaatacttcaaagataagataatttctcgagatgatgggactaaaaaggacaag
aaggatctggatattgtgatggggacagaaaatgctatcctcattcttgatgataaagaa
gaggtatggccgaatcacaacgataatctgatgttgatggagagatacctctttttcaaa
tcaagttgtcaggaatttggatacaaattcaaatcacttactgaattgcagagtgatgaa
gatgaaacaaatggagcactttccaaaatactcaaagtgctcaaacaaatccactccgcg
ttctttgatgaacttcaaggagaccttattgatcgagatgtgaggcaggttttatcatca
cttagaggtgaagtcttaagcggatgtgtgattgttttcagccataattttcgtagtgat
ttacgaccactcaagaacatggcaaggcggttaggagctacttgttacacaaatcctgac
gccactgtgacacatgtagttgctactgaatttgtaactaaggaaacccggtgggcaacg
caacataataagttcttggttagtcgccattggttagaggcttcacatatcttttttcaa
aagcaacctgaggagaacttcattcttaggcaaaggcagtag
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