Trifolium pratense (red clover): 123896673
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Entry
123896673 CDS
T08949
Name
(RefSeq) ABC transporter E family member 2-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123896673
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
123896673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
RsgA_GTPase
AAA_22
NACHT
Fer4_6
AAA_23
AAA_29
AAA
Rad17
nSTAND3
TsaE
ORC-CDC6-like
AAA_24
SRP54
Fer4_10
Fer4_16
AAA_30
Fer4_21
Fer4_2
Fer4_4
AAA_5
AAA_19
Fer4_9
Motif
Other DBs
NCBI-GeneID:
123896673
NCBI-ProteinID:
XP_045802991
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All DBs
Position
LG7:complement(56040755..56044531)
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AA seq
620 aa
AA seq
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MTIHGDAGCFVCAVVDNMTRIAIVNNDKCQPKKCRQECKKNCPVVKQGKLCIEVTSVSQI
AYISEELCTGCTMCIKKCPFGAIKIINLPENLLDKDTTHRYGPNTFKLHRLPVPRPGQVL
GLVGTNGIGKSTALKILAGNVKPNLGRFKEPPDWQEILTHFRGSELQNYFTRMLENDSKA
IIKPQYVDHLPKSVQGNVGQLLDQQNERDMKEQICADLELNQVLDRNVGDLSGGELQRFA
IAYVAIRNSEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFI
CCLYGQPGEYGVVTLPFSVREGINIFLSGFVPTENLRFRDVSLTFKVAETPEEIAEEVQT
YNRFKYPTMTKTQGNFRLRAVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTIEGG
SDVEMPEFNVSYKPQKISPKSQLSVRNLLHRRIPDAYTHPQFISDVMKPLLIEQLMDQEV
QNLSGGELQRVALCMCLGKDANIYLIDEPSAYLDSEQRIVAAKVIKRFILHRKKTAFIVE
HDFIMATYLADRVIVYEGQPSIDCTANSPQSLLTGMNLFLSHLDITFRRDPTNYRPRINK
LGSTKDREQKNARTYYYLDD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacgatacatggtgatgccggatgttttgtttgcgccgtcgtcgataacatgacgcgt
attgccatcgttaacaacgacaaatgccaacccaaaaagtgtcgtcaagagtgcaagaag
aattgtcctgtcgtcaaacaaggaaaattatgtatcgaggttacttctgtgtcccagatt
gcttacatatctgaggaattgtgcactggatgcactatgtgtattaagaaatgtcctttt
ggagccatcaaaattatcaacttgccagagaatttgttggacaaagataccactcataga
tatggtcctaatacctttaagctacacaggttgccggttcccaggccggggcaagtgctt
ggtttggttgggacaaatggaattgggaagtccactgcacttaagattttggctggaaat
gtgaagcccaacttgggtcgtttcaaagaaccccctgattggcaggaaattttgacccat
tttcgaggatctgaattgcagaattactttactcgcatgctagagaatgattcgaaggct
atcatcaagcctcagtatgttgaccatcttccaaaatctgtgcaagggaacgtggggcag
ttgttagaccaacaaaatgagagagatatgaaggaacagatttgtgctgatcttgagctt
aatcaagttttagaccgtaatgttggtgatctttcagggggtgagctccaaaggtttgcc
attgcatatgttgccatccgaaattcagagatatacatgtttgatgaaccttccagttat
cttgatgtgaaacaaaggctgaaagctgctcaagttgttcggtcattgctcaggcctaat
agctatgtaattgttgtcgagcacgatcttagtgttttggactacttatcagactttatt
tgctgtttgtatggccaacctggtgaatacggtgttgtaacactccctttctcagtcaga
gaaggaattaatatcttcttgtccggctttgttccaacagaaaatcttaggtttcgggat
gtctctcttactttcaaggttgcagagactccagaggaaattgctgaggaagttcaaact
tataatcgattcaaatacccaaccatgactaaaactcaaggcaatttcaggcttcgtgca
gttgaaggagaatttacagattcacagattattgtgatgctgggtgagaatgggacagga
aagacaacattcattcgtatgctggctggtttgttgaaacccgatactatagaaggtgga
tctgatgtggagatgcccgagttcaacgtatcatacaaacctcagaaaattagcccaaag
tcccaattatctgttagaaacttgctacatcgaagaatccctgatgcatatactcatccc
cagtttatttcagatgtgatgaagccactacttatagaacagttgatggaccaagaggtt
caaaatctttctggtggagagttgcaaagagttgccttatgcatgtgtcttggaaaggat
gcaaacatctatctgatagatgagccaagtgcatatcttgattcggaacaacgtattgtt
gctgcaaaagtcatcaagaggtttattcttcatagaaagaaaacagcctttatcgttgag
catgatttcatcatggcaacttatcttgctgacagagttatcgtttacgagggtcaacct
tcaattgattgtactgcaaattctccacaatcattgcttactgggatgaaccttttctta
tctcatcttgatatcacatttagaagagacccaactaattaccgcccaaggatcaacaaa
cttggatcaacaaaggacagagagcaaaagaatgctcggacttattattaccttgatgac
tga
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