Trifolium pratense (red clover): 123896745
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Entry
123896745 CDS
T08949
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123896745
Membrane trafficking [BR:
tpra04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
123896745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
123896745
NCBI-ProteinID:
XP_045803062
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All DBs
Position
LG7:complement(15018293..15049725)
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AA seq
1836 aa
AA seq
DB search
MLHLRHRRDSTPATTKWRNKFDENLEQWPHLNELVHCYTTDWVKDENKYGHYESIGTPSF
HNQIYEGPDTDIETEMRLAGARRTKGEDISEDDIPSTSGRQFMETADGEHLVVSKHFGQS
PLPAYEPAFDWENERSLIFGQRIPETPISHGMKISVKVQSLQFQAGLSEPFYGTICLYNR
ERREKLSEDFYFHILPTEIQDAKITCDPRAIFYLDAPSASVCLLIQLEKHATEEGGVTPS
VYSRKDTAHLTEREKQKLQVWSQIMPYKESFAWAIVSLFDGSIGAASVGPGSPSSPLAPS
VSGSSSHEGVFETSTKVSLDGKLNYSNGNSVVVEVSNLNKVKESYTEESLQDPKRKVHKP
VKGVLRLEIEKHQISQADLDNMSECGSATNDSVDPGDRLADSMSGKYPSNGCDDPQGSIS
RWNVSDAKEVLGNGANQHGTSDFNADDFQAFDFRTTTRNEPFLQLFHCLYVYPLTVSLGR
KRNLFIRVELREDDGDIRRQPLEAIYPRDPTLGTSFQKWGHTQVAVGARVACYHDEIKLS
LPAMWTPTHHLLFTLFHVDLQTKSEAPKPVVIGYAALPLSSHAQLRSEINLPILRELVPH
YLQDAGRERLDYLEDGKNVFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELL
EAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAE
RNHFLVNYVDCAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLE
LIVKSMALEKTRLFYHSLPIGEDIPPMQLKDGVFRCIMQLYDCLLTEVHERCKKGLSLAK
RLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQPVLHECKLTFLQIICDHDLFVE
MPGRDPSDRNYLSSVLIQELFVTWDHEDLSLRAKAARILVVLLCKHGFDVRYQKPEDKLY
IAQLYLPVIGQILDEMPVFYNLNSVEKREVSIVILEIVRNLDDASLVKAWQQSIARTRLF
FKLMEECLLLFEHKKPADGMLLGSSSRNPVGETPASPKYSERLSPAINNYLSEASRQEVR
PQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPLLRQKLEL
WEENLSASVSLQVLEVTEKFSTMAASRSIATDYGKLDCITAVFMSFLSRNQPLSFWKAFF
PVFNSVFDLHGATLMARENDRFLKQVTFHLLRLAVFRNDNIRKRAVVGLQILVRCSFHYL
TQTARLRVMLIITLSELMSDVQVTQMRSDGSLEESGEARRLRKSLEEMKDESKSSLLLEE
CGLLDSALIAIPEKKAEHRWSWSEVKYLSESLLLALDGSLEHALLAPVMTVDRYAAAESF
YKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARSDGVWNKD
HVAALRKICPMVSSEITCEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCAS
ILELVIPVYKSRRVYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFYGDKFGKL
DKKEYIYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKAEELQPGVCYLQIT
AVDAVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKNQGGLEDQWKRRTVL
QTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatctccgtcaccgtcgagattctactccggccaccaccaaatggcgtaataag
tttgatgagaatcttgagcagtggccacacctcaatgagcttgttcattgctacactacg
gattgggttaaggatgagaacaaatacggtcactatgaaagtattggaacgccgtcgttt
cataatcagatatatgagggacctgatactgacattgagactgaaatgcggcttgctggt
gcaagacgaacgaagggtgaagacattagtgaggatgacatccctagtacttcaggaagg
cagtttatggaaactgcagatggtgaacatttggttgtttcaaagcattttggtcaatcc
ccccttcctgcttatgagccggcatttgattgggaaaatgagaggtcattgatatttggg
caaaggataccggaaactcctatatcacatggaatgaagatttctgtaaaggttcagtct
ttacaatttcaggcaggattgtccgagcccttttacggtaccatttgcttatacaatagg
gagagaagagagaaattatcggaagacttttactttcacatcttaccaactgaaatacag
gatgccaaaattacctgtgatcctcgcgcaattttttacttagacgcgccatctgcttca
gtttgtttgttaatccagttggagaagcatgctaccgaagaaggcggagttactccatct
gtttattcacgtaaagatactgcacatttgactgagagagagaagcaaaaattgcaggtg
tggtcccaaatcatgccgtacaaagagtccttcgcatgggccattgtgtcattatttgat
ggcagtattggtgcagcttcagtagggcctggttctccaagcagcccgcttgctcctagt
gtatctggttcaagttcgcatgaaggtgtttttgagactagtaccaaagtctctttagat
ggaaagctgaattattcaaatggaaattctgttgtggttgaggtttcaaacttaaataaa
gtcaaagaaagctataccgaggaatcacttcaggatcccaagcgtaaagtacataaacct
gtcaaaggagttttaagactggaaattgaaaagcaccagatttctcaagctgatttggat
aatatgtcagaatgcggtagtgcaaccaatgattctgttgatcccggggatcgccttgct
gattccatgtctggaaagtatcctagtaatggttgtgatgatcctcagggtagtatctcc
aggtggaacgtcagtgatgcgaaggaagttctgggcaatggagcaaatcaacatggaacc
tcagattttaatgctgatgatttccaagcttttgacttccgcacaactacaagaaacgag
ccgtttttgcaactttttcactgcctgtatgtgtatccgttgactgtaagtttgggtagg
aaaaggaatttgtttatacgggttgaactcagagaggacgatggtgatattcgtagacag
ccattggaggcaatttatcctagagatccaactctagggacatcatttcagaaatggggt
cacacccaagttgctgttggggctagggttgcttgctaccatgatgaaattaaactttcc
cttcctgccatgtggacaccaacacaccatcttctatttactttatttcatgttgatctg
caaacgaaatcggaagcaccaaagccagtggtaattggatatgcagcacttcctttatcg
tcacatgctcagttgcggtcggaaataaatctcccgattttgagagagttggtcccacat
tatctccaggatgcaggacgggagagattggattatttggaagatggaaaaaatgtcttc
agactacgtttacggttatgttcttctttataccctatcaatgaacgtattagagatttt
tttctcgaatacgatcgacacactctccgaacaagtccaccttggggttctgaactgcta
gaggctattaatagtttgaagaatgttgattctactgctttacttcagtttcttcaccca
attcttaacatgctgcttcatcttatcggcaatggtggagaaacactccaggttgcggct
ttccgggctatggttaatattgtgaccagggtgcagcaggagtcagttgatgacgctgaa
agaaatcattttctagtcaactatgttgactgtgctttcgatgattttgggggtcgtcaa
ccaccagtataccctggattgtccactgtctggggaagtctggcacggagtaaggctaaa
gggtatcgtgttggaccagtgtatgatgatgttttagcaatggcatggttttttctggag
ttaattgttaaatcaatggcattggagaaaactcgcctcttctatcatagccttccaata
ggtgaagatatcccaccgatgcagttgaaggatggtgtattcagatgcataatgcagttg
tatgattgccttctcactgaggtgcatgagcgctgcaagaagggtttaagcttggcaaag
cgcttgaatagtagtttggccttcttttgttatgatcttctatcaattattgagccacga
caagtttttgagttggtatcattatatctcgataagttctctggtgtatgtcaaccagtt
cttcatgagtgcaaacttacctttctacaaataatctgtgaccatgatctttttgttgaa
atgcctgggagagacccttcagataggaactacctttcgtctgtattgatacaagaactc
tttgttacttgggatcatgaagatctgtctctacgggcaaaggcagcaagaatcctggta
gtgctcttgtgcaagcacggatttgatgtgagataccaaaagcctgaagataagttgtat
atcgctcagctatatttgccggttattggacagatattagatgagatgcctgttttctac
aacctgaattctgttgagaagcgggaagtttccatcgtaattctggaaatagttcgaaac
cttgatgatgcatcactggtcaaggcatggcagcaaagcattgcccggactagattgttt
ttcaagctcatggaggaatgcttacttctatttgagcacaaaaagcctgctgatggcatg
ttacttggctctagttctcgcaaccccgtaggggagacacctgcttcccccaaatactct
gagagactttcacctgcaatcaacaactatttatctgaggcctcaaggcaggaagtcagg
cctcagggaacacctgataatgggtatctatggcagagagtaaattcccagttaagctct
cctagccagccatattccttgagagaagctcttgcccaagcacagtcttctaggattgga
gcttctgctcaagcacttcgagaatctttgcacccacttttgaggcaaaaattggaacta
tgggaagagaatttgagtgcttctgtcagtcttcaggtcttggaagtgactgaaaaattt
tcaacgatggcagcatcacgtagcattgctacagattatggaaaacttgattgcatcaca
gctgtattcatgagctttctatctagaaatcagccattgtctttttggaaagcatttttc
cctgtatttaatagtgtgtttgatttacatggggcaacactaatggcaagagaaaatgac
cgttttctaaagcaagtcactttccatctacttcggcttgcagttttcagaaatgacaac
atcaggaaaagggcagttgttgggcttcaaatacttgtgaggtgttcatttcattacctt
acacagacggcaaggttaagagtcatgttgatcatcactttatcagagctaatgtctgat
gtgcaagtgactcaaatgagatctgatggaagcctagaagagagtggtgaagcacggaga
cttagaaaatctttagaggaaatgaaggatgaaagtaaaagttctttgctgttggaggag
tgtggattacttgatagtgctcttatagccataccagagaaaaaggcagagcatagatgg
tcttggtcagaggtgaaatatctttctgaaagtctgcttttggcccttgatggtagcttg
gaacatgcactactggcccctgtaatgactgtggatagatatgctgctgctgaaagcttc
tataaactggcaatggcatttgccccagtccctgatcttcacataatgtggttacttcat
ctgtgtgatgcacatcaggaaatgcagtcatgggctgaagctgctcaatgtgctgttgct
gttgctggtgttgtaatgcaggcccttgttgccagaagtgatggtgtatggaacaaagac
catgttgcagctttacgtaagatttgtcctatggttagcagtgagatcacatgtgaagca
tctgctgcagaggtagagggatatggtgcttcaaaactaacagttgactctgctgtgaaa
tacctgcagcttgctaataagcttttttcacaagctgagctatttcatttttgtgcaagc
attctggaacttgtaatcccagtatacaagagcaggcgggtttatggacagctggctaaa
tgtcacaccttacttactaatatctatgaatcaatacttgaacaggaatctagtccgatt
cctttcactgacgcaacatactacagggttgggttttatggtgataaatttggaaaactt
gacaaaaaggagtatatatatcgtgaaccccgtgatgtacgtctaggggacataatggaa
aaacttagtcatatttatgagtccagaatggatggtaatcacactttgcatattattcca
gattctagacaagtgaaggctgaagagttacagcctggtgtctgctaccttcagatcact
gctgttgatgctgtcatggaagatgaggatttgggaagtagaagagagagaattttctct
ctttccactggaagtgttcgtgcccgtgtgtttgaccgatttttgtttgataccccattt
acaaaaaatggcaagaatcaaggtggattggaagatcaatggaaaagacgcactgttctt
cagaccgagggttcatttcctgctttagtaaataggctattggtaatcaaatccgagtcc
cttgaattttcacctgtagaaaatgccattggaatgattgaaacacgaacagctgcatta
cgaaatgagcttgaagagcctcgaagttctgaaggggatcaacttccaagactccagagt
ctacaaagaattctccaaggcagcgttgcagtacaagtaaatagtggagttttgagtgtt
tgcacagccttcttgtctggtgagcctgctacaagattacggtctcaggaactacagcaa
cttatagctgcccttctcgagttcatggctgtttgcaaacgcgcaatccgggtacatttc
agattgataggtgaggaagatcaggatttccatacacaacttgtaaatggatttcagtct
ctaactgcagagttatcacattacattcctgccattctctcagagctatga
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integrated database retrieval system
