KEGG   Trifolium pratense (red clover): 123896746
Entry
123896746         CDS       T08949                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like isoform X1
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tpra01002]
    123896746
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:tpra03110]
    123896746
Peptidases and inhibitors [BR:tpra01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   123896746
Chaperones and folding catalysts [BR:tpra03110]
 Other chaperones and cochaperones
  AAA proteases
   123896746
SSDB
Motif
Pfam: AAA Peptidase_M41 AAA_lid_3 DUF5906 AAA_16 AAA_22 RuvB_N TIP49 AAA_5 AAA_28 nSTAND3 ATPase AAA_18 AAA_33 AAA_14 Sigma54_activ_2 AAA_17 Sigma54_activat TsaE RNA_helicase FtsH_ext Mg_chelatase AAA_11
Other DBs
NCBI-GeneID: 123896746
NCBI-ProteinID: XP_045803065
LinkDB
Position
LG7:complement(14991820..15007147)
AA seq 989 aa
MDLIISHTPNPFLLSSSSLTPTLQNPNFFTLTPSFSNRRKLKLRASSTADPNGADGSSWS
QSLERASKRFLVKFGDMVKKEIGVDLGDGVVKAGEFVDGVKKNVGSEFQTLSLSEFVEWN
RFEHWKNLKNWDPRRIGALVLYIFVVAFACRGFYVAIQATFINRQRKELTEAYMEALIPE
PSPTNIRRFKKGLWRKTMPKGLKMKRFIERPDGTLVHDTNYVGEDAWEDDQDTSEEHVKQ
FIEDDERLNSEEKKTKDLAISAGEVQTEGTWRERLHKWREILGKERLVDQLNSSNAKYAV
EFDMKEVENSLRKDVAEKATATQGTRGLWIAKRWWRYRPKLPYNYFLNKLDSSEVEAVVF
TEDIKRLYVIMKEGFPLEYVVDIPLDPYLFEIITSSGVEVELLQKKQIHYFLKVAFAFLP
GLLILWLIRQSLSLLHITSSRFLYKKYKQLFDMVDAENFILPVGDVGETKSMAKEVVLGG
DVWDLLDELMIYMKNPMQFFERDVKFVRGVLLSGPPGTGKTLFARTLANQSGLPFVFASG
AEFTDSEQSGAARINEMFSLARRNAPCFIFVDEIDAIAGRHTRKDPRRRATFEALISQLD
GEKEKTGVDRVSLRQAVIFICATNRPDELDVEFVRSGRINRRLYIGLPDAEQRIKIFGVH
SSGKQLAEDVNFSQLVFRTVGFSGADVRNLVNEAAIMSVRNGHSKIFQQDIVDVLDKQLL
EGMGVLITEDEQKKSEERVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETS
ISVFYPREDMVDQGYTNFGYLKMQMVVAHGGRCAEHVIFGDDITDGGRDDLEKITKIARE
MVISPQNRRLGLIALTNRVGLTDRPDSSDGDLIRYRWDDPQVIPTKMSVELSELFTRELT
RFIEETEELAMNALRDNKHILDLVARELLEKSRITGLEVEEKLKTMSPVMFEDFVKPFQI
NIEEDGPLLHNDRVRYREPDLYPAPLHRG
NT seq 2970 nt   +upstreamnt  +downstreamnt
atggatctcattatttcccacactccaaacccatttcttctctcctcatcatcactaact
ccaactcttcaaaatcctaactttttcacgttaaccccatccttcagtaaccgcagaaag
ctcaaacttcgagcttcatctacagcagacccaaatggcgctgatgggtcttcttggtca
cagtcactggaacgcgcttcgaagcggtttttggtgaaattcggagatatggtgaagaaa
gaaataggtgttgatttgggagatggtgttgtgaaggcaggtgagtttgtggatggtgtg
aagaagaatgttgggagtgagtttcaaactctttcactgtccgagtttgttgaatggaat
cggtttgaacattggaagaatctcaagaactgggatcctaggcgaatcggtgctttagtt
ctgtatatatttgttgtagcatttgcttgtagaggattttatgtagcaattcaagcaact
ttcataaaccgccagaggaaagagttgactgaagcctacatggaagcgttgattcctgag
ccatccccaacaaacatcagaagatttaagaagggtttgtggaggaagacaatgccaaaa
ggcctgaaaatgaaaaggtttattgaaagacctgatggaacacttgttcatgataccaat
tatgttggagaggatgcatgggaggatgatcaggatacttctgaggaacatgttaaacaa
tttatagaggacgatgaacggttaaacagtgaagagaagaaaaccaaagatctggccatt
tcagcaggcgaagttcaaactgagggcacatggcgtgagagacttcataaatggagggaa
atccttggaaaagagcgtctcgttgatcaattaaattcctcaaatgccaaatatgcagtt
gagtttgacatgaaagaggttgaaaacagtcttcgcaaggatgtggcagaaaaagcaaca
gccactcagggaacaagaggtctgtggatagctaagagatggtggcgctatcgtcctaaa
cttccttacaattactttcttaacaaacttgatagttccgaggtagaagctgttgtcttt
acagaagatataaagagattatatgtgataatgaaagaaggtttcccattggaatatgtt
gttgatattcctcttgatccttatctatttgagattattacaagttctggagtggaagta
gagcttcttcagaagaaacagatccattattttttgaaggttgcatttgcatttttacct
ggattactaattctgtggcttataaggcagtctctgtctcttctgcacatcacttccagt
cgttttctttacaagaagtataagcaactctttgatatggttgatgcagaaaatttcatt
ctgccagttggagatgttggtgaaacaaaatccatggcaaaggaagttgtgttgggaggt
gatgtttgggatctgcttgatgagctgatgatctatatgaaaaatcctatgcagttcttt
gaaagggatgtgaagtttgttcggggtgttctactctctggacctccaggaacaggaaaa
acactttttgcaaggacgcttgcaaaccaaagtggattgccttttgtttttgcttctggt
gctgagttcacagatagtgaacagagtggagcagctaggattaatgagatgttttccctt
gctaggagaaatgcaccttgttttatatttgtggatgaaatagatgccattgctggaaga
catactcggaaggatccacgtagaagggcaacttttgaggctcttatttcacagcttgat
ggagagaaggaaaaaactggtgttgaccgtgtatccctcagacaagcggtcatatttatc
tgtgccacaaatagacccgatgaattagatgttgaatttgttcgatctggacgaattaat
cgtcgtctatacattggtttgcctgatgcagaacaaagaatcaaaatttttggtgtgcat
agttctggaaagcaacttgcagaggatgtgaatttctcgcagcttgtcttccgtactgtt
ggattctctggagcagatgtaagaaaccttgtcaatgaagcagcaattatgtcggtgaga
aacgggcattccaaaattttccagcaagatattgttgatgttctagataaacaactgctt
gagggtatgggtgtccttatcactgaggatgagcaaaagaagtctgaagaaagagtgtct
ttcgaaaaaaagagactgcttgctgtacatgaagccggtcatattgtgcttgctcactta
tttcctcggtttgactggcatgcattttcgcagctcctgcccggtggtaaggaaacttca
atatctgttttctaccctcgagaagatatggtagaccaaggttatacaaattttggttac
ttgaagatgcaaatggtagttgctcatggtggtcgatgtgctgaacatgttatatttggt
gatgatattactgatggaggaagggatgacctagaaaagataacaaagattgccagggag
atggtaatcagccctcaaaatagaaggttggggttaatagctttaacaaacagggttggc
ttaactgatcgaccagactcttcagatggcgatttaataagatatagatgggatgatcct
caagtaattcctacaaagatgtcggtagagttatccgagctcttcacacgggagttgaca
aggttcattgaagaaaccgaagaacttgctatgaatgctttgagggataataagcacatc
ctggacttggttgcaagggaactattggagaagtcacgaataactggattggaggttgaa
gaaaaattgaaaacaatgtctccggtaatgtttgaggactttgtaaagccattccaaata
aacatcgaagaggatggaccattgctgcataatgatcgtgtacggtatcgggaacctgac
ttataccctgctcctctccacagaggttaa

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