Trifolium pratense (red clover): 123896804
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Entry
123896804 CDS
T08949
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123896804
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpra04812
]
123896804
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
123896804
Cytoskeleton proteins [BR:
tpra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
123896804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_GCN1
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
HEAT_GCN1_C
TOR1L1_N
TPR_DNAAF5
Tti2
TPR_CAND1
HEAT_MROH2B_C
HEAT_Maestro
Adaptin_N
MMS19_N
UTP20
INTS1_R4
MMS19_C
Ltn1_1st
TPR_IMB1
Dopey_N
SEN1_N
Motif
Other DBs
NCBI-GeneID:
123896804
NCBI-ProteinID:
XP_045803142
LinkDB
All DBs
Position
LG1:46225565..46239746
Genome browser
AA seq
1427 aa
AA seq
DB search
MEEALELARAKDAKERMAGVERLHQVLEASRKSLSSTEVTSLVDCCLDLLKDSSFRVAQG
ALQALASASVLSGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWTCKNWRVREEFARTVTSAIGLFSSTELPLQRAILPPTLQLLSDPNPAVKEAAI
LCIEEMFAQAGSQFRDELQRHNLTSSLVKYINARLEGIQPKVQSSNGISSGYNIPGEINS
KKSSPKAKSSSKETSRFGGEGDVTEKGIEPIKVYSEKEFIREIEKISSTLVPEKDWSVRI
AALQRIEGLVLGGAADYPCFFGILKQLIGPLSTQLSDRRSTIVKQACHLLCFLSKDLLGD
FEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIVDCAKNDRSAILR
ARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPER
SRRLFSSFDPSIQRLINEEDGGKHRRHASPSIRDRSAPMSSTPNLTGYGTSAIIAMDRSS
SLSSGTSMSSGVLLSQAKPLGKGTERSLESVLHASKQKVSAIESMLRGLDLSNKHNSSAL
RSSSLDLGVDPPSSRDPPFPAAVSASNHLTTPSTTESSGLGVNRGSSRNGGLGLSDIITQ
IQASKDSSKLSYISNVGIEPSSDLLSYTSKRATEKLQGSSVDENSYTRETRRYMNPNVDR
QYMDASYRDGNYRDSQNGYVPNFQRPLLRKNVTARVSAGRRRSLDDSQLSVGEMSNYADG
PASLHEALTEGLSSGSDWSARVSAFNYLHLLLEQGQKGIQEVVQNFEKVMKLFFQHLDDP
HHKVAQAALSTLADIIRTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSMTLEANAKTY
SIDSLLPALLRSLDEQRSPKAKYAVIEFAIGSFNKHAMNPEGAANIGILKLWLAKLAPLV
HDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDDQNSLRRALKQRTPRIEVDLMNY
LQNKKERRNKSSYDPSDNVGTSSEEGYAGLSRKAHYIGRYSGGSLDSDGGRKWNSQDSNL
VKASLGQSASDETEEHLYQTDCDSGIVSSKAKDHSYTVNSMDQNFGFQTGQLGYVDSSMN
FEGLSSDVDANGLLSLEHLNIAEGFEHLSELNHNHHSAEDVTVNHLTNTGLGIPQILHMI
CSGGDGNTISSKRTALLQLVEASVANDHSVWIQYFNQILTVVLEVLDDSDSSTRELALSL
ILEMLKNQKDAMENSVEVVIEKLLNVTKDIVPKVSNEAEHCLTIVLSQNDPFRCLSVIIP
LLVTEDEKTLVTCINCLTKIVGRLSQEELMAQLPSFLPALFEAFGNQSADIRKTVVFCLV
DIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISHARTGKSIDAAAND
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcactggaactggcacgtgccaaggacgcaaaggaacgaatggctggtgta
gagcgtctccatcaagttctagaagcttctagaaagagtctaagttcaactgaagttact
tctctcgtcgattgttgcttggatctcttgaaggatagtagttttagggtcgcacaaggc
gctcttcaagctctggcttctgcctctgttctctccggcgatcatttcaaacttcacttc
aacgcgcttgttcctgctgtcgttgatcggttaggtgatgctaaacagcctgttcgtgat
gctgctagaaggctcttgctcactctcatggaggtttcatctcctacaataattgttgaa
agagctgggtcttttgcttggacatgcaaaaactggagagtcagagaggagtttgcgcga
actgtgacatctgcaattggtctattttcatctactgaactgccccttcaacgggctatt
cttcctccaactttgcaattgttgagtgatccaaatcctgctgtcaaggaagcagctatt
ttgtgcattgaggaaatgtttgcgcaagctgggtctcaatttcgcgatgaacttcagcgc
cacaatctcacttcttctttggtgaaatatattaatgctaggctagaggggattcaacca
aaagttcagtcttcaaatggtatttctagtggttataatatccctggagaaattaattcc
aagaaaagtagtccaaaggctaaaagttcatcaaaggagacatctcgttttggaggagaa
ggtgatgtcactgagaaaggcatagaacctatcaaggtgtattcggagaaggaatttatc
agggaaatcgagaagatttcatctacccttgtaccagaaaaggactggtcagtacgaatt
gctgccctgcagagaatcgaaggtcttgttttgggaggagctgctgattatccatgtttt
tttggaatcctaaaacagcttattggacctttaagcacacaactgtcagatcgtaggtct
accattgtgaagcaggcatgccatctattatgctttttgtcgaaagacctcttgggtgat
tttgaagcatgtgctgaaatgttcataccagtccttttgaagctggttgtgattactgtg
cttgtaattgcagagtctgcagataactgcataaaaacgatgctacgcaactgcaaagtt
gctcgtgtgcttcctcgaatagttgattgtgcaaaaaatgatcgcagtgcaatacttcgt
gcaaggtgctgtgattatgctcttttaatactagaacattggcctgatgcaccagaaata
cagcggtcagcagatttatacgaggatatgataaggtgttgtgtttcagacgcaatgagc
gaggtgcggtcgactgcaaggatgtgctatagaatgtttgcaaaaacttggccagagcgt
tcccgtcgcctattttcatcctttgacccttctattcaaaggttaataaatgaagaggat
ggaggcaaacataggcgacatgcatcgccttccattcgtgatagaagtgcaccgatgtca
tcaactcctaatctaactggttatggaacttcagctattattgcaatggacagaagttct
agtttatcatcagggacatctatgtcctctggtgttcttctttcacaagctaagccactt
ggtaaaggtacagaacgtagtttagaaagtgtactgcatgcaagcaaacagaaggtcagt
gctattgagagcatgcttagaggtttggatttgtcaaataagcataattcatctgctctg
cgatcttcaagtttggatctaggagttgaccctccctcatctcgagatcccccattccct
gctgctgtttcagcctcaaatcatctgactaccccttcaacaacagaatcatctggtttg
ggtgtcaatagaggtagtagccggaacggtggtttgggtttatctgatataatcacccaa
attcaagcttccaaagattctagcaagttatcatatattagcaatgttggtattgagcct
tcatcagatttgttatcatacacaagtaaacgggctactgaaaagttacaaggaagttct
gttgatgaaaatagttacacccgggagactaggcgatatatgaaccccaatgtggatagg
cagtatatggatgcctcttatagagatgggaactatagggattcacagaatggttatgtc
cccaattttcagaggccactattgagaaagaacgtaactgcacgtgtgtcagctggcagg
agaaggagtcttgatgatagtcaattatctgttggagagatgtcaaattatgcagatgga
ccggcatctcttcatgaagctcttactgaaggacttagctcaggttctgactggtctgcc
agggtttctgcctttaattaccttcacttgttattggagcaaggtcaaaagggtattcaa
gaagttgtccagaattttgagaaggtaatgaagttattttttcagcacttggatgacccc
catcataaagtcgcacaggcggctctctccacacttgcagatattattcgtacatgccga
aagccctttgagggttacatggaacgaatgttaccccatgttttttctcgtttaattgac
cccaaagagcttgttaggcaagcatgctctatgactttggaggctaatgctaaaacatac
agtatagattccctcttgcccgcattgctacgctctctcgatgaacaaaggtctccaaag
gctaaatatgctgttattgagtttgcaatcggttcctttaacaagcatgcaatgaatcca
gaaggtgctgctaatattggcatcctaaaactatggcttgccaagttagccccattagtt
cacgataaaaacacaaaacttaaagaagcagctattacatgcattatatcagtatactct
cactttgattcatctgcagttttgaattttattcttagtttgtcagttgatgaccaaaat
tctttgagacgagcccttaaacaacgcacccctcgcattgaagtagacttaatgaactat
ctgcagaacaagaaagagcggcgtaataagtcttcatatgatccatctgataatgtagga
acatcctctgaagagggatatgctggtttgtctaggaaagctcattacattgggaggtat
tctggcggttctctcgatagtgatggtggcaggaaatggaattcccaagattcaaacctg
gttaaagccagtcttggccaatcagcttctgatgaaactgaggaacatctgtatcagact
gattgtgatagtggtattgttagttcaaaagccaaagatcattcttacacagtcaattca
atggatcaaaactttggctttcaaactggccaacttggatatgtggatagtagcatgaac
ttcgaaggtctatcatctgatgtggatgctaatggtctcctgtcattagaacatttaaac
attgccgaaggctttgaacatctctctgaattgaaccataatcatcactcagctgaagat
gtgacggtcaaccacctgacaaacacaggactcggcattcctcaaattcttcatatgata
tgcagtgggggtgatggaaacactatttcaagcaagcggactgcacttctacagttagtt
gaagcttctgtagcaaatgatcattctgtttggatccagtatttcaatcagattttgact
gttgtgcttgaggttctggatgattcagattcctcaaccagagagcttgctctttcattg
atacttgaaatgcttaaaaaccagaaagatgccatggaaaattctgttgaggttgtaatt
gaaaagctgcttaacgttacaaaggatattgttcccaaggtctcaaatgaagcggagcac
tgcctgacaattgttttatctcagaatgatccattcagatgtttaagtgttattatccct
ctactggttaccgaggacgagaaaactttagtcacttgcataaattgcttgaccaagatt
gtggggcggctctctcaggaagaactgatggctcagttaccctcatttctgcctgcattg
tttgaagcttttggaaaccagagtgcggatatccgtaagactgttgttttctgtctagtg
gatatttatatcatgcttgggaaagcattcttaccatatttggaagggcttaacagcaca
cagttgaagttggttaccatttacgcaaaccgaatctcacatgcaaggacaggaaaatca
attgatgctgctgctaacgattag
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integrated database retrieval system
