Trifolium pratense (red clover): 123896862
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Entry
123896862 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123896862
04121 Ubiquitin system [BR:
tpra04121
]
123896862
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123896862
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123896862
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123896862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
Rad50_zn_hook
zf-C3HC4_3
zf-Nse
FAR1_N
UBZ_FAAP20
Anti-TRAP
zf-C2H2_ZFAND2
Zn_ribbon_6
CxC4
Motif
Other DBs
NCBI-GeneID:
123896862
NCBI-ProteinID:
XP_045803228
LinkDB
All DBs
Position
LG7:complement(10178677..10180776)
Genome browser
AA seq
331 aa
AA seq
DB search
MSLSPPRERINGQRRNFQLYWCFQCNRTVRVAPYNTSELICPRCFGQFICEINIPRPRLV
VDFTAHDPSPEARLLEALSLMLDPPIRRFNTETQTGRPRRGRPTQQVPVHRHTGDHHHPT
QTQPEPEPEIQHRPRTWVILQPIDPSNSNTFQPVITRGRQGPIPRGIDARDYFFGPGFNE
LIDQITENDRQGPPPVPERGINAIPTVKIESKNLKENSHCPVCQEEFEIGGEARELQCKH
IYHSDCIVPWLRLHNSCPICRQEITVSSDEDECGEGDGEGRLRRCLRWTRLSSLWPFQGR
YRRVHPQRDNGSASSSTIRDSNPRRHSCCIL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgagtcctccaagagaaagaatcaacggccaacgtagaaacttccaactctac
tggtgcttccaatgcaaccgcaccgtccgtgtcgcaccatataacacctccgaattaata
tgtccacgctgcttcggtcaattcatatgtgaaatcaacataccaagaccacgactagtg
gttgacttcaccgcacacgatccttccccagaagcgcgtttgttagaagcactttcccta
atgctcgatccacccatccgtcgctttaacactgaaacccaaacaggacgcccacgtcgt
gggcgtcccacacaacaagttcctgtacaccgtcacacaggagatcatcaccatcctaca
caaacacaacccgaacccgaacccgaaatccaacatcgtccacgtacatgggtaattctt
caaccaattgatccatcaaattcaaacacgttccaaccggtgattacacgtggacgacaa
ggaccgattccacgtggcattgatgctagagattacttttttggtccgggatttaacgaa
ctaatagatcagataacagaaaacgaccggcaaggaccaccaccggtgccagaaagaggt
ataaacgcgattccgacggtgaaaatcgaaagcaaaaatctgaaagagaattcgcattgt
cctgtttgtcaagaagagtttgaaatcggcggtgaagcgagggaacttcagtgtaaacat
atatatcattctgattgtattgttccatggcttagacttcataattcttgtccaatttgc
cgtcaagagattactgtttcttctgatgaagatgagtgtggtgaaggtgatggtgaaggt
aggttacgcaggtgtttgaggtggactcgtctttcttctctttggccttttcaaggaagg
tatcggagagttcatcctcaaagagataatggttctgcttcttcttcaacaataagggat
tctaatccaaggcggcactcttgttgcattctttaa
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integrated database retrieval system
