Trifolium pratense (red clover): 123896887
Help
Entry
123896887 CDS
T08949
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123896887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123896887
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123896887
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
123896887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
123896887
NCBI-ProteinID:
XP_045803259
LinkDB
All DBs
Position
LG7:complement(10418471..10423381)
Genome browser
AA seq
224 aa
AA seq
DB search
MRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQQMSDQTLVRCEYSMANFS
TGDRMRKPKGGDRRSTEISLVIRQTVEACILTHLMPRSQIDIYVQVLQADGGTRSACINA
ATLAFADAGIPMRDLVTSCSVGYLHSTPLLDLNYVEHSAGGPDVTVGILPKLDKVTLLQM
DSKLPIDILENVMQLSTEGCKAIANYIREILLENAKQLEYRRGV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaaattcgagcagagattggtgctgtatctaaagctgatgggtctgccattttt
gagatgggtaataccaaagtaattgctgctgtttatggacctagagaggttcaaaatagg
agccaacaaatgagtgaccagactctggttcgatgtgaatacagcatggctaattttagc
accggtgaccgcatgagaaaaccaaagggtggtgacaggagatcaactgaaatttctctg
gttattcgacaaaccgtggaagcatgcatattgacacatttaatgccccgttcccagatt
gacatttatgtccaagttctccaagcagatggaggaactagatctgcttgcataaatgct
gcaactttggcttttgccgatgctgggatccctatgcgagatcttgtaacttcctgtagt
gttggatacctccatagcacccctctgcttgatttgaactatgtagaacacagtgctggg
ggtcctgatgtaactgtaggaattttgccgaagttggataaagtaacgcttcttcagatg
gattctaaactaccaattgacattttggaaaatgttatgcaattgtctacggaaggctgc
aaagcaattgcaaactacatacgagaaattttacttgagaacgcaaagcaacttgagtat
cgacggggtgtatag
DBGET
integrated database retrieval system
