Trifolium pratense (red clover): 123897011
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Entry
123897011 CDS
T08949
Name
(RefSeq) cyclin-H1-1 isoform X1
KO
K06634
cyclin H
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03022
Basal transcription factors
tpra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123897011
09124 Replication and repair
03420 Nucleotide excision repair
123897011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123897011
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123897011
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123897011
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123897011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
PKMT_2nd
Motif
Other DBs
NCBI-GeneID:
123897011
NCBI-ProteinID:
XP_045803449
LinkDB
All DBs
Position
LG1:complement(13310139..13315943)
Genome browser
AA seq
331 aa
AA seq
DB search
MADFQTSTHRSKWIFSPQKLVEKYTDANQRAKQTLEQCGATLMEVDADGSLSYPESQTTA
NNSGEKHSRIKPLSIEEEQCIKVFYENKLQEVCNNFHFPHKIQATALIFFKRFYLQWSVM
EHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPY
RSVEGFTDYMEEFCNAGEDELQMLKALQNTARLEVDKVMLTDAPLLFPPGQLALAALRTS
NALHKVLDFDSFLSRIFSHQNSTHTMAELLESLDAIDSWVRKYRSPSEKELKHINRKLKS
CWGQSSHDEGKKREKKSKHKSRKSSNEAQNA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttcagacctctacccaccgatccaagtggatcttctctcctcaaaaactg
gttgagaaatatacagatgctaatcagagagccaaacaaaccctagagcagtgtggggca
actctaatggaagtagatgctgatgggtctttgtcatatccggaatcccagacgactgca
aacaatagtggtgaaaaacattctcggataaaacctcttagtattgaagaggagcaatgt
ataaaggtgttttatgaaaacaagctacaagaagtgtgcaacaatttccacttccctcat
aagatccaggcaacagccctcatattttttaaaaggttctatctgcaatggtcagtgatg
gaacatcaaccaaaaaatataatgttgacatgcatatatgctgcttgtaagatagaagaa
aatcatgtatcggctgaggagcttggtaaggggatttcacaggatcatcaaatgattctc
aataatgagatgatagtttatcagagtctggaatttgatcttattgtttatgctccgtat
cgctcagttgaaggttttacagattatatggaggaattttgcaatgctggtgaggacgag
cttcaaatgctcaaggctttgcaaaatacagcaagactagaagttgataaagtgatgctt
acagatgcaccactcttatttcctcctgggcagttggccttggctgcactacgcacctca
aatgctctccataaagttcttgactttgatagttttctgagcagaattttttcccatcag
aattctacgcacacaatggccgagcttcttgaatcattggatgcaattgattcttgggtt
agaaaatatagaagtccttcggagaaagaattgaagcatatcaaccggaaactgaagtct
tgttggggtcagagctctcatgacgagggaaagaagagggagaagaaatcaaagcacaag
tccagaaagagctcaaacgaagcacaaaatgcttag
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