Trifolium pratense (red clover): 123897190
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Entry
123897190 CDS
T08949
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123897190
03009 Ribosome biogenesis [BR:
tpra03009
]
123897190
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123897190
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123897190
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Helicases
123897190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
123897190
NCBI-ProteinID:
XP_045803680
LinkDB
All DBs
Position
LG7:53114417..53122992
Genome browser
AA seq
756 aa
AA seq
DB search
MSPSFIFDPPSDEEIEELSEHESDEEESEQESQSESEGRESESEDERIEESRVSKKNTVS
PWDFTKYSESVVEEHARRSTTSVDDKIYAVRKRSAPVVPLPDSDDDSGSDAEADKHEDYR
SEEEDEDKGNAGDKKSFFAPSDGTSFSADSFLQLNLSRPLLRACEALTFTKPTPIQAACI
PLALTGRDICGSAITGSGKTAAFALPTLERLLYRPKRMNAIRVLILTPTRELAAQVLSMI
EQLARFTDIRGCLAVGGMPIKEQEAALRTMPDIVVATPGRMIDHLRNSMSVDLDDLSVLI
LDEADRLLELGFSAEIQEIVRLCPKKRQTMLFSATMTEEVNDLIKLSLSKPLRLSADPSA
KRPTSLTEEVVRLRNMRESNPEAVLLAMCSKTFTSKVIIFSGTKQTAHRLRIIFGLAGLK
VAEFHGNLTQAQRLDALNQFRMQQVDFLIATDVAARGLDIIGVQTVINFACPRDLTSYVH
RVGRTARAGRAGAAITFVTERDRSLLKAIIKRAGSKLRKRTVAEQSILKWSKTIEQMEDQ
ISEVLEEEREERILRKAEMEATKAENMIKHRGDIYSRPKRTWFVTEKEKKLSAKAAKASL
DKEDGPSHKVVSAQQAEDLKLKEKRKREREKNMPRKKRRKLEAAREMLEDDEQDDKPRGK
GTDNEKAGLTLADLAYRRAKAVKATKRALDSGKIVKKPQKKSNKSNPSRKPSSSRTEDMR
EQFQNDMKDKKPKQKGSGIGKKAKKSFKSKSRYKRK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccaagtttcatcttcgatcctcccagtgacgaagaaatcgaagaattatccgaa
cacgaatcagacgaagaagaatcagaacaagaatcacaatcagaatcagaaggacgagaa
tcagaatcagaagatgaacgcatagaggaatcgcgagtttccaagaagaatacagtgtct
ccatgggacttcacaaaatactctgaatcagttgttgaagaacacgctcgcagaagtaca
acttcagtagacgataaaatctatgccgtcagaaaacgttcagcgccggttgttcctttg
cctgactccgacgatgatagtggctctgacgccgaagccgataaacatgaagattataga
tcagaagaagaagatgaagacaagggtaatgctggcgacaaaaagtccttttttgctcct
tctgatggaacatctttcagtgctgattcgttcttgcaactcaatttgtctcgtccttta
ctcagggcttgtgaggccttgacttttactaaaccaacaccaattcaggcggcttgcata
ccattagcattgactggtcgtgatatatgtggaagtgccattactggatcgggaaagact
gctgcatttgcactacctactttagagaggttgctgtaccgtcccaaacgcatgaatgca
ataagggtccttattcttactccaaccagagagttggcagcccaagttctcagtatgatt
gagcagcttgctcgttttactgatataagggggtgcctggctgttggtggtatgccaata
aaggagcaagaggctgccttgagaacaatgccagacattgttgtggctactccagggcgc
atgatagatcatttacgcaattctatgtcagtggatttggatgatctttctgttttgatc
cttgatgaagcagatcgtcttttggagctggggtttagtgctgaaattcaggaaattgtt
cgattgtgtcccaaaaaaaggcagaccatgcttttttcagcaaccatgactgaggaggtt
aatgatcttattaaactttccctatcaaaacccctacgtctttctgctgatccatctgca
aaacggccaacatccttgactgaggaggtggttagattaagaaacatgcgtgaatcgaat
ccggaagcagttcttcttgcaatgtgctccaaaactttcacttcaaaagttatcattttc
agtggaaccaagcaaactgcacataggttgaggattatatttggattagctggattgaaa
gttgctgagtttcatggaaatcttactcaggcccaacgtcttgatgctttgaaccaattc
aggatgcagcaagtggattttttgattgcaactgatgtggctgctcgtgggcttgacatt
attggtgttcaaacagttatcaattttgcatgtccacgcgatctcaccagctatgttcat
cgagtgggtcgtactgcaagagctggaagagcaggagctgctattacatttgttaccgaa
cgtgaccgatcacttttgaaagctattataaagagggctggttcaaagctgagaaaacgc
actgttgctgagcaatctatattaaaatggtctaaaacaattgagcaaatggaggatcag
atttctgaagtacttgaagaagagagggaagaaaggatcctaaggaaagctgaaatggag
gccacaaaggccgaaaacatgattaaacataggggagatatctactcccgcccgaaaaga
acctggtttgttacagagaaggagaagaagctttcggcaaaagcagcaaaggcatccttg
gataaggaagacggtccttctcataaggtggttagtgcccagcaagctgaagacctaaaa
ttgaaggaaaagaggaagcgggaacgagagaaaaatatgcctagaaagaagcgcagaaag
ttggaagcagctagagagatgttggaggatgacgagcaagatgacaaaccaagaggtaag
gggacagataatgaaaaggctggattgacacttgctgatcttgcttaccgacgtgcaaaa
gcagtaaaggccaccaagagggcactagactctggcaagattgtgaagaagcctcaaaag
aagtctaataaatctaatccttcgcgaaagccttcctcttcaaggacagaagacatgcgg
gagcaattccaaaatgacatgaaggataaaaagccaaaacagaaaggttctggaatagga
aagaaggcaaagaaatcattcaaaagcaagtcaaggtacaagaggaagtag
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