Trifolium pratense (red clover): 123897232
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Entry
123897232 CDS
T08949
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123897232
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
123897232
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
DUF4143
Zn_ribbon_RRN7
FtrD-like
Motif
Other DBs
NCBI-GeneID:
123897232
NCBI-ProteinID:
XP_045803741
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All DBs
Position
LG7:complement(30609228..30611053)
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AA seq
535 aa
AA seq
DB search
MSSSRHCTHCTSTSFTRDDDTGQLYCDSCGVTQPYDQFESNLGGITGPQGTYIHIGTAGS
GTLYSYRDRKLLSARTSIKQFTNRLGLASKTIEIDSMISNITDGEFGQGDWFQVLIGACC
YVVMRKHERPFSMDEIANAVNCDVYELGRMIIRVVDFLDLRGSDFPEFDIVHMLKRSIDS
CNCFEKVDRSLVDRMKKQGIFLLQCAVKLFLSTGRRPLPLVVAVLVLVAEINQVDVRLEV
LAKEVHAIVSTCRTRYKELLETLVKVAKVLPWGKDITKKNIVKNVPFVMQYMEKKSMSNP
VEKSTSVDRTGLDLGDVVTECLTQEEEYEYGVDGLVLRKDSQYFSSQSNADTEGIRDVEA
LQISPECLSLMYENFLNDNRSAMSSRSANVQKRRRVEFDFQECSEWWNGESEMSKQLILK
QLLAKDIGVETMPPSFINGQLKCKIRREKINAAKKRIKRITHPLQADLDDTVNIGILDST
GPEKRKKRRGMVVDGIDWEDLIIETLILHQVKEEEIEKGHYNTLLGLYVFNSGIV
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctctcgtcactgcactcactgcaccagcacctcattcactcgcgacgacgac
accggccaactctactgcgactcctgcggcgtcactcaaccgtacgatcaattcgaatcc
aatctcggcggtataaccggtccacaaggtacctacatccacatcggaaccgcaggttca
ggtacactttactcttacagagaccgtaaattactttccgcacgtacttcaattaaacaa
ttcactaatcgattaggtttagcttccaaaactattgaaattgattccatgatttctaac
atcaccgacggtgaattcggtcaaggtgactggtttcaagttttgattggtgcttgttgt
tatgttgttatgcgaaaacacgaacgacctttttcgatggatgaaattgctaatgctgtt
aattgtgatgtttatgagcttgggagaatgattattagggttgttgattttttggatttg
agagggagtgattttccagagtttgatattgttcatatgttgaaaaggagtattgatagt
tgtaattgttttgagaaggttgataggagtttggttgatagaatgaagaaacaggggatt
tttttgttacagtgtgcggtgaaattgtttttgagtactggtcgtaggccgcttcctttg
gttgttgcagttttggttttggtcgcggagattaatcaagtcgatgttaggttggaggtt
ttggctaaggaggttcatgctattgtttctacttgtagaactaggtataaggagcttctt
gagacgcttgtgaaagttgctaaagtgttgccttggggaaaagatattacgaagaaaaat
attgttaagaatgttccttttgtgatgcagtatatggagaagaagtctatgtcaaatcct
gttgagaagagtacgagtgttgatcggactgggttagatttgggggatgtggttactgag
tgtttaacacaagaggaggaatatgagtatggggttgatggattagttctgcgaaaagat
tctcagtatttttcatcgcaaagtaatgctgatacagaaggtattagggatgttgaggcg
ttacagatttcacctgaatgtttatccctgatgtatgagaattttttaaatgacaatcgt
agtgctatgtcttcaaggagtgcaaatgttcagaaacggagaagggtggaatttgatttt
caagagtgtagcgagtggtggaatggagaatcagaaatgagcaaacagcttatactgaaa
cagttacttgcgaaagatattggggtggaaaccatgccaccgtcatttatcaatggtcaa
ttgaaatgtaaaattaggcgagagaagatcaatgctgcaaagaagcgaataaaaagaatc
actcatccattacaagctgatctagatgatactgtaaatattggtattttagatagcact
ggccctgagaaaaggaagaagagaagaggaatggtagttgatggtattgattgggaagac
ttgattattgagacacttattcttcaccaagtaaaggaggaggaaattgagaagggtcat
tacaataccttactaggcctatatgtgtttaactctggcattgtataa
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