Trifolium pratense (red clover): 123897281
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Entry
123897281 CDS
T08949
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123897281
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123897281
04121 Ubiquitin system [BR:
tpra04121
]
123897281
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123897281
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123897281
Membrane trafficking [BR:
tpra04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
123897281
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123897281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP7_C2
DUSP
Motif
Other DBs
NCBI-GeneID:
123897281
NCBI-ProteinID:
XP_045803816
LinkDB
All DBs
Position
LG7:50193771..50211580
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AA seq
855 aa
AA seq
DB search
MECSSEDSSDNNTQGPDSNNKDQRVYFVPKRWWKDAQDAMPVDLDKKKGIVYASSPGSSY
GPMKIINNIFNSDLVFNLQREEESRHVLENGEVGVSGRDFALVSGDMWLQALKWHSDSKN
AMKDDKGFSTTDSDIGDVYPLQLRLSVQRETKSFEVRISKKDNTIELYKRACKMFSVDSE
MLRIWDFSGHITLLFNDDENHVPKDGQRQSDQETLLELQVYGLSDSMKGREGNFSGSASM
KMNGANSLSFSLGPGEAGSLGLTGLQNLGNTCFMNSALQCLTHTPKLVDYFLEDYGREIN
PDNPLGMNGEIASAFGDLLRKLWAPGASPVAPRVFKSKLARFAPQFSGFNQHDSQELLAF
LLDGLHEDLNRVKCKPYVEAKDGDGRPDEEVADEYWHYHLARNDSVIVDVCQGQYKSTLV
CPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSNNSDGMSQLSPHTITVPKHGKFEDL
TRALSIACSLGPDETLSVAEVYNNRIIRFLEDPADSLSLIREADKLVAYRFPKDNAPLVV
LINQRMEEQYIYGKLDPKWKAFGIPIVASLRNIVNGSDLRNLYLKWFHPLQDSVEEALEN
CVVSERTEEVTEIEGVTVAGSDPNVNGLDTPSDGEMEFYITDDKGTVKNSKILMNDPLAI
NGELNRLHVLVCWSEKEINKYDTQLCSPLPEVCKFSFSAKRPQESVSLYKCLEAFLQEEP
LGPEDMWYCPGCKDHRQASKKLDLWRLPEILVIHLKRFQYSRFMKNKLETYVDFPVDNLD
LSAYITHGNQKSYHYTLYAISNHFGSMGGGHYTAFVHHGGDQWYDFDDSRVYPISKEKIK
SSAAYVLFYRRVFED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttcttccgaagattcttcagataataacactcaaggaccagactcaaataac
aaggaccaacgagtctatttcgttcctaaaaggtggtggaaggatgctcaagatgcaatg
cctgttgatttggataagaagaagggaattgtgtatgcatcttcgccgggttcatcgtat
ggtccgatgaagatcattaataatatattcaattcagatcttgtgtttaatcttcagagg
gaggaagaatcacggcatgttctggagaatggtgaagtgggtgtatctggacgggatttt
gctttggtatccggggatatgtggttgcaggcactcaagtggcatagtgattcaaaaaat
gcaatgaaagatgacaaaggcttttcaacaaccgacagtgatattggagatgtataccca
ttacagctcaggctttctgttcagagggaaacaaagtcctttgaagtgagaataagcaaa
aaggacaatacaattgagctttataaaagagcctgcaaaatgttcagcgtggattcagag
atgttacgcatttgggacttttcaggtcatataaccttgctttttaatgatgacgaaaat
catgtgcccaaagacggtcaaaggcaatctgatcaggagactcttctggagttgcaagtt
tacgggttgtcagactcaatgaaaggtagggaagggaatttttctggcagtgcttcaatg
aagatgaacggtgcgaattctttgagcttctctttaggccctggtgaagctggttccttg
ggattaactggattacaaaacctaggaaatacatgcttcatgaacagtgcccttcagtgc
ttaacacatacgccaaagcttgtcgactattttctggaagattatggcagagaaatcaat
cctgataacccattgggcatgaatggtgagatagcgtccgcatttggagatttacttagg
aagttatgggctcctggtgcaagtcccgtggcaccaagggtgttcaaatcaaagcttgct
agatttgctcctcagtttagtgggtttaatcagcatgattcacaagagcttcttgctttt
ttattggatggacttcatgaagatttgaatcgtgttaaatgtaagccttatgtagaagcc
aaggacggagacggtcggccagatgaagaagttgctgatgaatattggcattatcatctg
gctcgcaatgattcagtcattgttgatgtgtgtcaaggccaatataaatccacattagtt
tgtcctgtttgtaggaaggtctctgtgacatttgatccattcatgtacttatcattacct
ctaccttcaacaacaatgcggacaatgactttaaccgttgttagtaacaatagtgatgga
atgtctcaattatcgccacatacaattactgttccaaaacatggaaaatttgaagatctt
acacgtgctcttagcattgcatgctctttggggcctgatgagaccttatcagtagctgag
gtatacaacaaccgcatcatacgtttccttgaagatccagctgattcattatcattgatc
agagaggctgacaaactagttgcttatcgatttcccaaagataatgcccctctggtcgtc
cttataaatcagcggatggaggagcaatacatctatgggaaattggatccaaagtggaag
gcatttggaattcctattgtagctagtcttcgcaatattgtaaatggatctgatctccgc
aatttgtatctaaagtggtttcatccattacaagattcggttgaagaggccttagaaaat
tgtgttgtgtctgagagaacggaagaagttaccgaaattgaaggggttacagttgctggg
tcagatcccaatgtgaacgggttagatacgccttcagatggagaaatggagttttacata
acagatgataaggggactgtcaagaattccaaaatattaatgaatgacccacttgcaata
aatggagagttaaaccgactgcatgtgcttgtatgttggtcagaaaaagagattaacaaa
tatgacacacagctttgtagtccgttgcctgaggtttgcaagtttagtttttcagcaaag
agaccccaagaatcagtttctctgtataagtgccttgaagcattcttgcaagaagaacct
cttggaccagaagacatgtggtattgtcctggctgtaaagatcatcgtcaagctagtaag
aagttagatctttggagacttcctgaaattttggttattcatctcaagaggtttcaatat
agtcgattcatgaaaaacaagctggagacatatgttgacttccctgtggataatcttgat
ctgtcagcttatattacccatgggaatcagaagtcttatcattacacactttatgctatc
agtaaccattttggaagcatggggggtggtcattatactgcatttgtacatcatggcggt
gatcaatggtatgactttgatgatagccgtgtttatcccatcagcaaggagaagataaag
tcttcagctgcctatgttcttttctacagaagagtttttgaagattaa
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