Trifolium pratense (red clover): 123897315
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Entry
123897315 CDS
T08949
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123897315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123897315
03110 Chaperones and folding catalysts [BR:
tpra03110
]
123897315
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123897315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123897315
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
123897315
Messenger RNA biogenesis [BR:
tpra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
123897315
Chaperones and folding catalysts [BR:
tpra03110
]
Heat shock proteins
HSP60 / Chaperonin
123897315
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
123897315
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123897315
Exosomal proteins of other body fluids (saliva and urine)
123897315
Exosomal proteins of breast cancer cells
123897315
Exosomal proteins of colorectal cancer cells
123897315
Exosomal proteins of bladder cancer cells
123897315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
123897315
NCBI-ProteinID:
XP_045803862
LinkDB
All DBs
Position
LG7:40736704..40741325
Genome browser
AA seq
594 aa
AA seq
DB search
MSSSTFSATSSCNLSSSAAISSFPFAAGKRTSNRVVLARKNRNVKVSAMAKELHFNKDGS
AIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGA
KLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVAEL
KKMSKEVEDSELADVAAVSAGNNYEVGNMIAEALSRVGRKGVVTLEEGKSAENSLYVVEG
MQFDRGYISPYFVTDSEKMSVEFENCKLLLVDKKITNARDLINILEDAIRSGFPILIIAE
DIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLTLDKA
GKEVLGNASKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNQIEAAEQDYEREKLNERIAKL
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDT
LANDEEKVGAEIVRRALSYPLKLIAKNAGVNGSVVSEKVLSNDNTRYGYNAATGKYEDLM
SAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEAAPVGNPMDNSGYGM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcaactttctcagcaacctcctcttgcaatctctcctcttccgctgccatt
tcttctttccccttcgccgccggtaaaagaacttctaacagagtcgttctcgctagaaag
aatcggaatgttaaggtttctgctatggctaaggagttgcattttaataaagatggttcc
gctattaagaaacttcagaatggtgtgaataagcttgcggatcttgttggtgttactctt
ggtcctaaaggaaggaatgttgttcttgagagcaagtatggttcgccgaaaattgttaat
gatggtgtcactgttgctaaagaggttgagttggaggatccggttgagaatattggtgcc
aagttggtgagacaggctgctgccaagacaaatgatttggcaggtgatggaaccacaacc
tcggttgttctagctcagggccttattgcagaaggtgtaaaggttgtcgcagctggtgca
aaccctgtgctcattacacgtggtattgagaagacaactaaagctcttgtggctgagctt
aaaaagatgtcaaaagaggttgaagatagtgaactggcagacgtggcagcagtcagtgca
gggaacaattatgaggttggaaatatgattgctgaagccttgagtagggttggtagaaag
ggtgttgtgacacttgaggagggaaagagtgctgagaacagtctttatgtcgttgagggt
atgcaatttgaccgtggttatatttcaccttactttgttaccgacagtgagaagatgtct
gttgaatttgagaactgcaagttactattggttgacaaaaagattaccaatgctagggat
cttattaacatactggaggatgcaattagaagtggattccctatattgatcattgcggag
gatattgaacaagaagctttagcaacacttgttgtgaacaaacttagaggatctctgaag
attgcagcacttaaggctcctggattcggagaacgcaaaagccaataccttgatgatatt
gccattttgacaggaggtactgttatcagagaggaagttggccttaccttagacaaagct
gggaaagaggttctgggtaatgcctccaaggtggtgctcaccaaggatacaaccacaatt
gttggtgatggaagtacccaggaagcagttaataagagagttgcacaaattaagaaccaa
attgaggccgcagagcaagactatgaaagggagaagctgaacgaaaggattgcaaaactg
tctggtggtgtggccgtaatacaggttggtgcacaaactgagacagaacttaaggaaaag
aaattgagagttgaagatgctcttaatgctacaaaggcagctgttgaggaaggtattgta
gttggaggtggttgcactttgctcagacttgcatcaaaggtggatgccatcaaggatacc
cttgcaaacgatgaggaaaaagttggagcagaaattgttagaagagctcttagttaccct
cttaaattaatagcaaagaatgctggtgtaaatggcagtgttgtgagcgagaaggttctg
tccaacgacaatacaagatatggctataatgctgccactggcaaatacgaagatttaatg
tctgccgggatcattgatccaacaaaggtggtcagatgctgcctggaacatgcatcctct
gttgccaaaacattcttaatgtcagactgtgttgttgttgagattaaggaacctgaggct
gcacctgttggcaaccccatggacaattcaggatacggtatgtag
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