Trifolium pratense (red clover): 123897378
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Entry
123897378 CDS
T08949
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123897378
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
123897378
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
123897378
Prokaryotic type
123897378
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
123897378
NCBI-ProteinID:
XP_045803936
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Position
LG7:56913032..56918813
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AA seq
972 aa
AA seq
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MRLCCVWLKPLKHRKRVKMAQFLNFRNFLFFPSLPLSSKPSPHLRFLSTLVSSSSSSSSS
SPRRRNVNVPPLHLRRRYTKTTTTPMVELEETPSFGTSGFNKRRAEGTDKTDLPKKNLQL
KVRKLNPINTISYVQILGTGMDTQDTSPAVMLFFDKQRFIFNAGEGLQRFCTEHRIKLSK
IDHIFLSRVCSETAGGLPGLLLTLAGMGDEGMSVNIWGPSDLKYLVDAMRSFIPNAAMVH
TKSFGPTFGTNESTVQCQNDPIVLVDDEVVKISAIILQPCRSPSQKTDHSTNIVDSPNGK
KLSAAKLGDMSVVYVCELPEIKGKFDPEKAKALGLRPGPKYRELQLGNSVESDRQNVMVH
PSDVMDPSIPGPIVLVVDCPTESHLEAMLSAKSLATYGDQVGNLPKADRSVSCVIHLTPE
SVVSCSNYQNWMKTFGSAQHIMAGHEKKNVEVPILKASARTATRLNYLCPRFFPAPGFWS
LANQNCSKPGSLASSEDSLSALSNVISAENLLKFTLRPYVNLGLDRSSIPTKVSSSEIID
ELLSEIPEVVEAAQQVSQLCQDSSQTKEDTVPVADHQMVIEEPWLCEDGITPACLENIRR
DDLEIVLLGTGSSQPSKYRNVTSIYINLFSKGGVLLDCGEGTLGQLKRRYGVSGADDVVK
SLTCIWISHIHADHHTGLARILALRRDLLRGVPHEPVLVVGPRKLKRYLDAYQRLEDLDM
LFLDCKHTLAASLDDFENDMQETVKSQDLSNNNAEINASKVDSTLFAKGSQMQSYWKRPG
SPVDKDAVYPLLRKLKGVIQEAGLSALISFPVVHCPQSYGVVLKAEERINSVGKVIPGWK
IVYSGDTRPCPELIEASRDATVLIHEATFEEGMVEEAIAKNHSTTNEAIEMGEKANVYRI
ILTHFSQRYPKIPVFDKAHMDKTCIAFDLMSINIADLAVLPKVLPYLKLLFRNDMIVDES
DDVVVDVAASAS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaggttatgttgtgtttggctaaaacctttgaaacatagaaaaagggtcaaaatggcc
caatttttaaactttcgcaattttcttttcttcccttctcttcctctctcctctaaaccc
tctccccatctccgatttctctcaacccttgtctcctcctcttcttcttcttcttcttcc
tcaccacgccgccgtaacgttaacgttcctcctcttcatctccgccgcagatacaccaaa
accacaaccaccccaatggtggaacttgaagagaccccttccttcggcacttccggtttc
aacaaaagaagagcagaaggaactgataaaactgatttacctaagaaaaatcttcaactc
aaagttcgaaaacttaatcctattaacaccatttcttatgtacagattttgggtactgga
atggatactcaagatacttcacctgctgttatgcttttctttgataaacaaaggtttata
tttaatgctggggagggactacaaagattttgcactgagcataggattaagttatcaaag
atagatcacatatttctttctcgtgtctgttccgagactgccggtgggctgccaggttta
ctgcttactttggctggcatgggagacgaggggatgtctgtcaacatatggggtccttca
gatcttaagtatttagtagatgccatgagatcttttatccccaatgccgccatggttcac
acaaaaagctttggacctaccttcggcaccaatgagtccactgtgcagtgtcaaaatgac
cccattgttcttgttgatgatgaggtggtcaaaatatcagccatcatccttcaaccttgt
cgaagcccttcacaaaagacagatcatagcacaaatattgttgattcccccaatggtaaa
aagctgtcagctgctaagcttggtgatatgtctgtagtatatgtttgcgagctgcctgag
attaagggaaaatttgatccggagaaggctaaggcacttggcctcagacctggtccaaag
tatcgtgaactgcaacttggaaattcggtggaatctgatcgccagaatgttatggttcat
ccaagtgatgtcatggatccttctattcctggtcctattgtactcgttgtagattgtcca
acagaatctcacttagaagcaatgttgtctgcaaaatcactggccacgtatggggatcaa
gtgggaaacctgccaaaggctgataggagtgtttcatgtgtaattcacttaactcctgaa
tctgttgtaagttgttcaaactaccaaaactggatgaagacatttggttctgcacagcat
atcatggccggacatgaaaagaagaatgtagaggttcctattttgaaagctagtgcaaga
actgcaacacgacttaattacttgtgtcctcggttctttccagctccaggattttggtct
cttgcaaatcagaattgctcaaaacctggatctcttgcttcaagtgaggattctttatca
gcactttctaacgtcatttctgctgaaaatcttctcaagtttactttgcgtccctacgtt
aatcttgggttggatagatctagtattccaactaaagtgtcttcctcagaaattattgat
gagttgctgtcagagattccagaggttgtggaagcagctcagcaagtcagtcagctctgt
caagattccagtcagacaaaggaggatacggttcctgtggctgatcaccagatggtgatt
gaagagccatggctgtgtgaagatggtattactcctgcttgcttggaaaatataaggaga
gacgacttggagatagtgcttcttggaactggttcatcccagccatccaagtatcgaaac
gtgacctcaatctatataaatcttttttcgaaagggggtgtgctcttggactgtggtgaa
ggaaccttaggacagctcaaaagaagatatggcgtaagtggtgctgatgatgttgtgaaa
tctttaacctgcatttggatttcacatattcatgccgatcaccacactgggttggctagg
attcttgctctgcgccgtgatttgctgaggggggttcctcatgaaccagtgcttgttgta
ggaccaaggaagctaaagagatatttagatgcgtaccaaagactagaagatttagatatg
ctgtttcttgactgcaaacacaccttagcagcgtcattggatgattttgagaatgacatg
caagaaacagttaaatctcaggatctgagcaataataatgcagaaataaacgcatcaaaa
gtcgattcaactttatttgctaaagggtctcaaatgcaaagttattggaaaagaccaggt
agtcctgttgacaaagatgcagtttatcccctcctaaggaaattgaagggggtaatccaa
gaagccggtctcagtgccttgattagttttcctgttgtacattgtccacagtcatatggt
gttgtcctaaaagcagaagaaaggattaatagtgttggaaaagtgatacctggttggaag
attgtatattctggtgacacacggccctgcccagagctaatagaagcatctcgagatgca
actgttcttatacacgaggcaacatttgaggagggtatggtagaggaggctatagcaaaa
aaccacagcaccactaatgaagccatagaaatgggagaaaaagctaacgtatatcgtatc
atacttactcacttcagccaaagatatccaaaaattcctgtatttgataaagcacacatg
gataaaacatgtattgcatttgacttgatgagtatcaatatagcagatttagcagtgctt
cccaaagttcttccatatctgaaattgcttttcagaaacgacatgatagttgacgagtca
gacgatgtagtagtagatgttgccgcttcggcttcttga
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