Trifolium pratense (red clover): 123897473
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Entry
123897473 CDS
T08949
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123897473
Membrane trafficking [BR:
tpra04131
]
Protein recycling
Others
EARP complex
123897473
Endosome - Golgi transport
Tethering complex
GARP complex
123897473
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
Vps54_N
COG7
COG4_N
DUF401
XhlA
MPH2
Motif
Other DBs
NCBI-GeneID:
123897473
NCBI-ProteinID:
XP_045804085
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Position
LG7:complement(32051478..32062966)
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AA seq
819 aa
AA seq
DB search
MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILAAVRQQSNSGTKAKEDLA
AATRAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQQLSDACLVVDALEPSVKEELVNNFCNRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRSNEEIWKIFPSSWHVSYRLCILFCKKTRKQLEDILSNLKEKPDV
GTLLLALQRTLEFEDELAEKFGGGTQNREIGNEIEEIGRGANSSSSASDIRKKYEKKLAA
HQGSESEGKDGSKDLAVPGAGFNFRGIVSSCFEPHLTVYVELEEKTLMDSLEKLVQEETW
DIEEGGQSSVLSSSMQLFLIIKRSLKRCSALTKSQTLFNLFKVFQRILKAYATKLFARLP
KGGTGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDHQFADGV
DMSEVQDEFSAVITKSLVTLVHGLETKFDIEMAAMTRVPWGTLESVGDQSEYVNAINLIL
TTSIPTLGSLLSPVYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTIL
LEIPSLGRQTSSAASYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRI
LELKGLKKADQQSILDDFNKHGPGIKQTQITPTIAPAPPVAPVVPNPTAVGLVASREDVL
TRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagcgccttagagtacatcaatcaaatgttccctaacgaagcatcacta
tctggtgttgaaccgttaatgcaaaaaatccagaacgagattcgaactgttgatgctgga
attttagctgcagttcgtcaacagagtaattcaggaactaaggctaaagaagatcttgct
gctgctactcgtgctgttgaggaacttatgtataaaattagagaaattaaaactaaagct
gttcagagtgaaacaatggttcaagaaatatgtagggatattaagaaattggattttgcg
aaaaagcatataactacgacgattactgcacttcatcgtctcacaatgcttgtctctgct
gtcgaacaactccaagtgatggcttcaaaacgtcaatacaaagaggccgctgcgcagctg
gaggcggtgaaccagttatgtagccactttgaggcctatagggatattccaaagatcata
gaactgagggagaagtttaagaatatcaagcaaatactcaagtcacatgtgttttctgat
ttttctagcttaggtactggaaaggagacagaagaaaccaatttgctacagcagttgtct
gatgcttgcctggttgttgatgcattagagccttcagtaaaggaagagttggtaaataat
ttttgcaatcgggagcttacttcgtatgaacaaatttttgaaggagctgaactggcaaag
ttggataaaactgaaagaagatatgcatggattaagcgccgaatgagatcaaatgaagaa
atttggaaaatctttccatcttcgtggcatgtttcttatcggctgtgtatcttattttgc
aagaaaacaaggaaacaactagaggacattctttctaatttaaaggaaaagccagatgtt
gggaccttgttgttggctttacagcgaactttagagtttgaggatgagttggctgagaaa
tttgggggaggcactcaaaacagagagattggaaatgagattgaagaaataggaagaggt
gcaaattctagtagtagtgcttcagatatccggaagaagtacgaaaaaaagcttgctgca
catcaaggaagtgagagtgaaggaaaagatggaagcaaggatttggcagttcctggagct
gggttcaactttcgtggaattgtttcatcttgctttgaacctcatttaacagtatatgta
gaattggaagagaaaacactaatggatagtctggagaaacttgtccaggaggagacatgg
gatattgaggagggaggtcagagtagtgttttatccagtagcatgcagttgtttctaata
atcaagagaagcttgaagagatgcagtgctttgacgaagagccagacactatttaatttg
tttaaggttttccaaagaattcttaaagcatatgctacaaaactttttgcaagactccca
aaggggggaacaggaattgttgctgctgccacaggcatggatggacagataaagacatct
gatagggatgaaagagtgatctgttacattgtcaattcggccgaatattgccataaaacg
gctggtgaactggctgaaagtgtttctaaaataattgatcatcaatttgctgatggggtg
gacatgtcagaagtgcaggatgaattttcagccgttataacaaaatcattggtaacctta
gtgcatggcctggaaaccaaatttgacattgaaatggcagcaatgacacgtgtcccttgg
ggtactcttgaaagtgttggtgatcaatcagagtatgttaatgccataaatttgattcta
accaccagcattcctacacttggaagtcttctttcacctgtctactttcagttctttttg
gacaagcttgcgtcttctctgggtccacgcttttactctaacattttcaaatgcaagcaa
atatcagaaactggagctcaacagatgctattggatacacaagctgttaagacaatcctt
cttgaaattccttcccttggtagacagacatcaagtgctgcaagttattccaagtttgta
agccgtgagatgagcaaagctgaggcccttttgaaggttatactttctccggtcgattct
gtagcagatacttaccgtgccctactacctgagggtacacccatggaatttcagcggata
ttggagcttaagggtcttaaaaaagctgatcaacaaagcatactcgatgacttcaacaaa
catgggcctggaattaagcaaactcagattacacctacaattgcaccagctcctccagta
gctcctgttgtacctaatcccactgctgttggactggtagcttcacgagaggatgttcta
actagggctgctgcacttggacgaggagctgccacaacagggttcaagcggttcctagca
ctaactgaagctgccaaagacaggaaggacgggcctttcaggaagctctttaatccataa
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