Trifolium pratense (red clover): 123897546
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Entry
123897546 CDS
T08949
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123897546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123897546
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123897546
Enzymes [BR:
tpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123897546
Transcription machinery [BR:
tpra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
123897546
DNA repair and recombination proteins [BR:
tpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
123897546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
123897546
NCBI-ProteinID:
XP_045804188
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All DBs
Position
LG7:complement(21792430..21794840)
Genome browser
AA seq
333 aa
AA seq
DB search
MIREKVKVSTQTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTIDNIQDGSYTIDAVFMPVR
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE
NNQHKVTLPLFTFHDRLVKDKLRKXKKEIGLKSIFIDQLELPPRIYNCLKKSDIHTLLEL
LNKSQEDLMKIEHFRVEDVQNILNILQIDKHFA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgattcgagaaaaagtaaaagtatcaactcagacactacagtggaagtgtgttgaatca
agggtagacagtaagcgtctttattatggacgctttattctgtctccacttatgaaaggt
caagcagatacaataggcattgcaatgcgaagaattttgctcggagaaatagagggaaca
tgtatcacacgtgcaaaatctgagaaaataccacatgaatattctaccatagtaggtatt
caagaatcaatacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatggaactcgagacgcgtccatttgtttcaaaggtcctggatatgtaacagctcaagac
attattttaccaccttcggtggaaatcgtggataatacacaacatatagctaacctaaca
gaacctattaatttgtgtattgaattacaaattgagaggaagcggggatatcgtataaaa
acaatagacaacattcaagatggaagttatactatagatgccgtattcatgcctgttaga
aatgcaaatcatagtattcattcttatgtgaacggtaatgaaaaacaagagatactcttt
ctcgaaatatggacaaatggaagtttaacccctaaggaagcactttatgaagcctcccgg
aatttgattgatttgtttattccttttttacacgcagaagaagaaaacttgaattttgaa
aacaatcaacacaaagttactttacccctttttacttttcatgatagattagttaaggat
aaactaaggaaannaaaaaaagaaattggattgaaatccatttttattgaccaattagaa
ttgcctcccaggatctataattgtcttaaaaagtctgatatacatacattattggaactt
ttgaataagagtcaagaagaccttatgaaaattgaacattttcgcgtagaagatgttcaa
aatatattaaacattttacaaatcgacaagcattttgcataa
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