Trifolium pratense (red clover): 123897665
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Entry
123897665 CDS
T08949
Name
(RefSeq) syntaxin-132-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123897665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123897665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123897665
Membrane trafficking [BR:
tpra04131
]
SNARE
Syntaxin (Qa)
Stx-PM
123897665
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
123897665
Exosomal proteins of other body fluids (saliva and urine)
123897665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Fusion_gly
bAvd
Pox_EPC_I2-L1
DUF6584
SesA
MCPsignal
DUF7605
Motif
Other DBs
NCBI-GeneID:
123897665
NCBI-ProteinID:
XP_045804341
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Position
LG7:50659475..50665680
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AA seq
310 aa
AA seq
DB search
MNDLLTDSFVGEATNGQPSRQGDIEMGMQVQRSNSDLGMETFNKQIQDADKQIEKLSALL
QKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKAKIEAINRENLNNRQKPGC
EKGTGIDRARMNMTNALTKKFRDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDQTI
DHLIETGNSEQIFQKAILESGRGQVVSTVEEIQERHDAVREIEKKLLDLHQIYLDMAVLV
DAQGEILDNIESQVNNAVDHVQRGTTALQSAKKLQKNSRKWMCIAIMILLVIVAIIVVGV
LKPWKSNSGA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccttcttactgattcatttgttggtgaggctactaatggacaaccttctaga
caaggtgatattgaaatgggaatgcaagttcaaagaagtaactctgatttggggatggaa
acttttaataaacagatccaagatgctgataaacaaatcgagaagctgtccgcgctcctt
caaaagctaaaggaagctaatgaggaatcaaaagctgttacaaaagcatctgccatgaaa
gctatcaagaagagaatggaaaaagatattgatgaagttggaaagattgcacatggggtc
aaagcgaaaatagaagctatcaacagagaaaatctaaataatagacaaaagcctggctgt
gagaagggaactggtattgacagagcaaggatgaatatgactaatgccttgaccaaaaag
ttcagggatcttatgacagagtttcagactctcagacaaagaatacaagatgaatatcgt
gaggttgtggagagaagagttattacagtcaccggaactagaccagatgatcagacgatt
gaccacctgatagaaactggaaacagtgagcaaatcttccagaaagcaattcttgaatca
ggccgaggacaggttgtaagcacggtagaagaaattcaggagagacatgatgcagtgaga
gaaattgagaaaaaacttcttgatttacatcagatttaccttgacatggcagtgttggtt
gatgctcaaggagaaattttagacaacatcgaaagccaggtcaacaatgcagtcgatcat
gtccagagagggacaactgcacttcaaagtgctaagaaactccagaagaactctcgaaaa
tggatgtgcattgccatcatgatcctgttagtaatagtagctatcatagttgttggtgtt
ctcaaaccttggaagagtaacagtggcgcttga
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