Trifolium pratense (red clover): 123897883
Help
Entry
123897883 CDS
T08949
Name
(RefSeq) homeobox-leucine zipper protein HDG2-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123897883
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
123897883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
HTH_Tnp_1
DciA_cyano_C
MRP-L20
Motif
Other DBs
NCBI-GeneID:
123897883
NCBI-ProteinID:
XP_045804638
LinkDB
All DBs
Position
LG7:complement(48693448..48701198)
Genome browser
AA seq
772 aa
AA seq
DB search
MQTSLMIPASNMPSIIGRNNNNVGVFGFSSSLSLGQKMFQPNLMEAGQQHHHQLLPFDMT
TNNNNTSESDVPRIREDELFDSATKSGNSENQEAANSGDDQDQPRAKKKRYHRHTQHQIQ
EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTQLRTENEK
LRADNMRFREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISGIAAKYVGK
PVVSYPLLSPSSVPPRPLELGIGGFGGQPGIGGGDMYGAGDLLRSISGPTEADKPMIIEL
AVAAMEELIGMAQMGDPLWLTTLEGGSILNEEEYVRSFPRGIGPKPAGFKCEASRETSVV
IMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLV
PTRESYFVRYCKQHSDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVIWVE
HVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQDG
RKSMLKLAERMCISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPAGIVLSAA
TSFWLPVTPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANS
SQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGGVGGE
NGNGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEVA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaagtttaatgattccggcaagtaacatgccttcaatcatcggaagaaacaac
aacaacgttggtgtctttggtttttcttcatctctctctcttggccagaaaatgttccag
ccaaatctaatggaagctggacaacaacatcatcatcaacttctaccatttgatatgaca
acaaacaacaacaatacttcagaaagtgatgttccaagaatccgtgaagatgaattattt
gatagtgctacaaaatctggtaatagtgaaaatcaagaagctgctaattcaggcgatgat
caagatcaacctcgtgctaagaagaaacgttaccaccgtcatacacagcatcagatccaa
gaaatggaagctttttttaaggaatgtcctcaccctgatgacaagcaaaggaaggaacta
agcagagagttagggttagagccattgcaagtgaagttttggtttcaaaacaaacgtact
caaatgaagactcaacaagagaggcatgagaatactcaactaagaactgagaatgagaag
cttcgtgccgataacatgaggtttagagaagcgcttagcaatgcttcttgtcctaattgt
ggtggtccaactgctattggagaaatgtcgttcgatgaacatcacttaaggctcgaaaat
gctcgccttagagaagagattgataggatatcaggcattgctgcgaagtatgtcgggaag
ccagtggtcagttatccactactctccccttcatcggttccacctcgtcctctagaactc
ggcattggtggttttggaggacaaccaggaattggtggaggagatatgtatggagccgga
gatcttcttaggtcaataagtggaccaactgaagctgataaaccaatgataattgagcta
gctgttgctgcaatggaagaactcattggaatggcacaaatgggagatcctctttggtta
actacacttgaaggtggttccatactcaatgaagaagaatatgttaggtcttttcctaga
ggaattggtccaaaaccagctggttttaaatgtgaagcttcaagagaaacttctgttgtc
atcatgaatcatgttaaccttgttgagatcctcatggacgtgaaccaatggtccacagtt
ttttctggaattgtttcaagagcaatgacattggaagttctatcaactggggtggcaggc
aactacaatggtgcattacaagtgatgacagcagaacttcaagtaccttcaccactagtg
ccaactagagagagttattttgtaaggtattgtaagcaacattctgatggtacttgggca
gttgtggatgtttctttggacaatttgcgccctagcccttctgctagatgtagaagaagg
ccttctggttgcttaattcaagaaatgcccaatggctactcaaaggttatatgggtggag
catgtagaagtggatgatagaggtgttcataatctatacaaacaacttgttagctcagga
catgcatttggtgcaaaacgttggattgcaaccttagatcgacaatgtgaaagacttgct
agtgccatggcaaccaacattcccacagtcgatgtcggcgtgataacaaaccaagatgga
agaaagagcatgttaaaactagctgaaagaatgtgcataagcttttgtgctggagtgagt
gcttcaacagcacacacgtggacaacactttcgggtacaggagctgatgatgtaagggta
atgacccgtaaaagtgtagatgacccaggaagaccagctggcattgtccttagtgctgca
acttctttttggcttccagttacaccaaaaagagtttttgaatttcttagagatgaaaac
tcaagaagtgagtgggatatcctttccaatggtggagttgttcaagaaatggcacatatt
gccaatggaagagatactggaaattgtgtttctcttcttcgagtgaatagtgcaaattca
agccaaagcaacatgttgatattacaagagagttgcacagacacaacaggttcatttgtg
atctatgcacctgtagacatagttgcaatgaatgtggtactaaatggaggtgatccagat
tatgtagcacttcttccatctggatttgctatacttcctgatggtggtgttggtggtgaa
aatggaaatggtggatctttattaacagttgcatttcaaatattggttgattctgtgcct
actgcaaaactttcacttggatctgttgctacagttaataatcttattgcttgtactgtt
gaaaggattaaggcttctttgtcaggtgaagttgcttga
DBGET
integrated database retrieval system
