Trifolium pratense (red clover): 123898000
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Entry
123898000 CDS
T08949
Name
(RefSeq) RING-H2 finger protein ATL40-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123898000
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123898000
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
123898000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Ac45-VOA1_TM
DUF4381
Orf78
zf-RING_16
RRN9
zinc_ribbon_16
EAV_GS
zf-RING_4
PHD
SLX1_C
DUF4083
Sigma_reg_N
IBR_1
Prok-RING_4
RINGv
Motif
Other DBs
NCBI-GeneID:
123898000
NCBI-ProteinID:
XP_045804797
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All DBs
Position
LG7:complement(51825124..51827146)
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AA seq
244 aa
AA seq
DB search
MSNFNDDRNHDDEHNYYPFGNIYRGSSQSNFNKKILLTAIVSLILVLILVFALHLYARYV
LKRQARRRAAIHQLSLTVAQAHTQFTEPASTGLDQTLIATLPTFLFKGKQQDKKQNNDVL
NVVECAVCLSVVEDEEMMRLLPNCKHSFHVGCIDKWLASHSTCPICRTKVEPRLEPEARE
GPTLFEPPLEGTSDGDGGVSGSPKNISRLSSFRRILTRDRSSRRIQPSSTPRDDVIIDRD
LERQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattttaatgatgatagaaaccatgatgatgaacataattattatccatttgga
aatatctatcgtggatcaagtcagagcaatttcaacaaaaaaatcttgttaacagccata
gtttctttaatacttgtattaattttggtctttgctcttcatctctacgcaagatatgtt
ctcaaacgccaagctcgtcggagagccgccattcatcaactcagcctcaccgtcgctcaa
gctcatacacaattcaccgaaccagctagcactggactcgaccaaaccctcatcgctact
cttccaactttcctcttcaaaggtaaacaacaagacaaaaaacaaaacaatgatgttttg
aatgttgttgaatgtgcagtgtgtttgagtgttgtagaggatgaagaaatgatgaggttg
cttccaaattgtaagcatagtttccacgtgggttgcatcgataagtggttagcttcacat
tccacgtgtccaatttgtcgaaccaaggttgaaccgcggctagaaccagaggcacgtgag
ggtcccactttgttcgaaccaccattagaaggtacatcggatggtgatggtggtgttagt
gggtccccaaaaaatatttcacggttgagctcttttcgaaggattcttactagagataga
tcttcgagacgaatccaaccttctagtactccacgtgatgatgttattattgatcgtgat
ttagaaaggcaataa
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