Trifolium pratense (red clover): 123898003
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Entry
123898003 CDS
T08949
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123898003
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123898003
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123898003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_5
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
DUF2921
zf-C3HC4
zf-ANAPC11
PHD_NSD
zf-P11
zf-RING_16
zf-RING_UBOX
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
123898003
NCBI-ProteinID:
XP_045804801
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All DBs
Position
LG7:49785383..49790987
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AA seq
571 aa
AA seq
DB search
MVDFQRLELLLFQRRMWHENLFHVVFGCWVVLFLLCPVSGLRPLRDDQFRLTRKDESVVG
PFSEWNITGTYKGTWKFLDTANSSSRFPDTGRTNGNSIITLSSTRTTITGVHYVHGIVIF
DDLFDNEHGDGGAQISFEGVYIWPFKQLRMVTNSGKEGELNQYEDYILPNPYRLLAAFSS
QTLQGSSRDKMWRRKHSMMHELEKHCNAEISATVSHLPSSKNESEQDHFSLEGLMKSPPV
DDGANCLSPLLLNATSVIRIDVDYNKAVYYTLMVTFVSSLQVLLLNRQIMHSGTQSGAAK
VSILMIGQQALMDAHFTLLHLTIGMIVESLLIAFATVAFFKFVLFSIFETRYLVAIWKAG
SRSLINAEGYEAPRHEMWRELSLLHSCLYGTLLMAGIISMYELHNHMKLILLLMYTFWIP
QIIRNVFHDSRKPLDPHYILGITVTRLAIPLYIFGFPNNFMHIEPDKNWCVCLTVFLGLQ
AVFLLLQHYLGPRWFIPRQMLPEKYNYHRKFDHTKRHATECVICMTDIDLFRRTSDCMVT
PCDHFFHSGCLQIWMDIKMECPTCRRALPSA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggttgactttcaaagattggaacttttgctgtttcagaggagaatgtggcatgaaaat
ttgttccatgttgtatttggttgttgggttgttctgtttttactttgtcctgtgtctggt
ctcagacccttaagggatgatcagtttcgattaacaagaaaggacgaaagtgtcgtaggt
ccattttcagaatggaacataacaggaacatacaaagggacttggaaatttttagatacc
gcaaacagctcctcaagatttccagacaccggaagaacaaatggcaattccataatcaca
ttaagtagtacacgtacgacgataactggagtacattatgtccatggaatagttatattc
gatgatttgtttgacaacgagcatggtgatggtggtgctcaaatcagctttgaaggtgta
tacatatggccttttaaacagctcagaatggtaacaaacagtggaaaagaaggagagttg
aatcagtatgaagattatattttaccgaatccatatcgtcttcttgcagctttctcatct
cagacactgcaaggttcgtcgcgagataagatgtggagaagaaaacattctatgatgcat
gaattggagaaacattgtaatgccgaaatttctgcgacggtttcacacttgccatcatca
aaaaatgaaagcgagcaagaccatttttctctcgaagggttaatgaagagtcctccggtg
gatgatggcgcgaactgcttgtcaccgttactattaaatgcgacttctgttataagaatt
gatgtcgactataacaaagcagtctactatactttgatggttacttttgtctcttccttg
caagttcttctgttgaatcgtcaaatcatgcatagcggcactcaatctggagctgctaag
gtgtcgatactaatgattggtcaacaggcgttaatggatgcccattttacccttttacat
ctgactataggaatgatagttgaatccttgttaattgcttttgcaacggttgcatttttc
aagtttgtgctattctcaatttttgagacgagatatctcgttgccatttggaaggcaggt
agtaggtctttgattaacgcagaaggttacgaggctccgaggcatgaaatgtggcgtgag
ctttcacttttacacagttgtttatatgggacactgttaatggcaggcattataagcatg
tatgagttacataatcatatgaaactgattcttcttcttatgtataccttttggatacct
cagataatccgcaatgtttttcatgattcacgcaaacctttggatcctcattatatatta
ggaataactgttactcggctcgcaatcccattatatatatttggtttcccgaacaacttc
atgcacatcgaaccagacaagaactggtgtgtttgtttgacagtgtttcttgggcttcaa
gctgtgtttcttctccttcagcactatcttggaccgcgttggttcattcctcgtcagatg
ctacctgagaaatacaactatcataggaagtttgatcatactaaaagacatgctacagaa
tgtgttatttgcatgacagacattgatctttttcgcagaactagtgattgcatggtgaca
ccttgtgatcatttcttccattctggttgcttgcaaatatggatggatataaagatggag
tgtccaacttgccgtcgcgctttaccatctgcttag
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