Trifolium pratense (red clover): 123898081
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Entry
123898081 CDS
T08949
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123898081
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpra01007
]
123898081
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123898081
Enzymes [BR:
tpra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
123898081
Amino acid related enzymes [BR:
tpra01007
]
Aminoacyl-tRNA synthetase
Class I (G)
123898081
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123898081
Prokaryotic type
123898081
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1
CysS_C
DALR_2
Motif
Other DBs
NCBI-GeneID:
123898081
NCBI-ProteinID:
XP_045804894
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Position
LG7:5861825..5867182
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AA seq
567 aa
AA seq
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MGTLTLSLLKFYSPFSSTLFSHSARPVFPRAAVFRKNKLPSFRAVSSSSQPLTAEKNCNH
GENFRSKSSSPEIWLHNTMSKTKELFKPKVESKVGMYVCGVTAYDLSHIGHARVYVNFDL
LYRYFKHLGFEVCYVRNFTDVDDKIIARSTELGEDPISLSRRYCEEFCQDMVTLNCLSPT
EEPKVSEHMPQIIDMIEKILNNGYAYNVDGDVYFNVEKFPEYGKLSSRGLDDNRAGERVA
VDSRKKNPADFALWKSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDL
VFPHHENEIAQSCAACSKSDISVWMHNGFVNIDSVKMSKSLGNFFTIRQVVDVYHPLALR
YFLMSAHYRSPMNYSNIHLESASDRVYYIYETLHECESLLNQHDQTVRKDSVPSDTLSII
DSLYDVFLTSMSDDLHTPVVLAGLSDPLKSVNDLLHTRKGKKQQFRIESLAALKKSIGDV
LTVLGLMPSSYYEVLQQLKEKALARANLTEDEILKKIEERDAARIQKEYAKSDAIRKDLA
DVGIALMDSPNGTAWRPTIPIPLQEQL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggtacccttacactgtctcttctcaaattctactcacccttttcctccacgcttttc
tcccactcagctcgacccgttttcccccgcgccgccgttttcagaaaaaataaacttcct
tcctttcgcgccgtctcatcatcctctcagccgttaacggctgagaagaattgcaaccac
ggtgaaaatttccgttcaaagagttcatctcctgaaatatggcttcataacacaatgagt
aaaacgaaagagctttttaaacccaaagttgaatctaaagttggaatgtatgtttgtgga
gtcactgcttatgatcttagccatattggtcatgctcgtgtttacgtcaattttgatctt
ctttatagatattttaagcacttgggatttgaagtttgttatgttcgcaattttactgat
gtagatgataagataattgctagatcaacggagttaggagaagatccaattagtttgagt
cgacgctattgtgaagagttctgtcaagacatggtaactcttaattgcttgtctcctacc
gaggaaccaaaagtctccgagcacatgccacaaatcattgatatgattgagaagattctt
aataatgggtatgcatacaatgttgatggggatgtatactttaatgtagaaaaatttcca
gaatatgggaaattatctagtcgaggtctagacgacaatcgagctggtgagagggttgct
gttgattcaaggaagaaaaatcctgctgattttgctctatggaagtctacaaagccaggg
gagccattttgggaaagtccctggggtcctggacgacctgggtggcatattgaatgcagt
gctatgagtgcagcttatcttggttactcttttgacatccatggtggagggattgacctt
gtatttcctcaccatgaaaatgaaattgctcagagttgtgcggcttgtagtaaaagtgat
attagtgtatggatgcacaatggttttgtcaacattgactctgtgaagatgtctaaatct
ctgggaaactttttcacaatacggcaggttgtagatgtttaccatccgctggctttgaga
tattttttgatgagcgcccattatagatctcctatgaactactctaatatacaccttgaa
agtgcttcagaccgtgtttattatatatatgagacattacatgaatgtgaaagcttgctg
aaccagcatgatcagacggttaggaaggactccgtcccatcagatactttgagtattatt
gatagtctgtatgatgtttttctgacctcaatgtctgatgatcttcacactccagttgta
ttggctggactgtctgacccacttaaatcagtgaacgacttgctgcatactcgcaagggg
aaaaaacaacaatttcgaatagaatcacttgcagctttgaagaaaagcatcggagatgtc
cttacagttttaggtcttatgccttcaagttactacgaggttttgcagcagcttaaggaa
aaagctcttgcgcgtgcaaacttgacagaagatgaaatcttgaagaagattgaagaacga
gatgctgctagaatacaaaaggagtatgccaaatctgatgccataaggaaagatttggct
gatgttggtattgctcttatggatagtccaaatggcacagcttggaggcctaccattcct
attccgcttcaagagcagctctag
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