Trifolium pratense (red clover): 123898263
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Entry
123898263 CDS
T08949
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123898263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123898263
Spliceosome [BR:
tpra03041
]
Complex B
Other components
Prp19-related factors
123898263
Complex C
123898263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
123898263
NCBI-ProteinID:
XP_045805130
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All DBs
Position
LG7:30888933..30891287
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AA seq
611 aa
AA seq
DB search
MAALKELLPEPKSSTTTYYDHSNDPWFKQRFTTTEEEKAAAVKPKLVPPYMKRSGFVPRK
VEDFGEGGAFPEIHVAQYPLDMGRNKAAKPGSAILPVTVDAHGKVAYDAIVKQNENAKKI
VYTQHKDLIPKILRNDEDGEMSDVDDDEAQREIDETMQETKAALEKIVNVRLSAAQPKNV
PQHNSDAKYIKYKPSQQNAAFNSGARERVIRMVEMPVDPLEPPKFKHKRVPKASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVAMRSKVQKEMLLKEKERKEQELRALAQKARADRIGVPPPPAAVPLV
SERSGVDDGDMSVEYEHRGRDRDREREREKDYPKESRVEREERLKREKIREERRKERERE
RRLEAKDAAMGKKSKITRDRDRDISEKVALGLASTKQGTEVMYDERLFNQDKGMSSGFAT
DDQYNVYDKGLFTAQPTLSTLYRPKKDVDNETYGGADEQLEKIMKTDRFKPDKGFTGASE
RAPPRDRPVEFESEEADPFGLDQFLTEVKKGKKALDNVGGGGTMRASAGSSMRDSSDGGS
GRTRIGFERGR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttgaaggagcttcttcccgaaccgaaatcatcaacaacaacttattacgat
cacagcaacgatccatggtttaagcagagattcaccacaacggaagaggaaaaagctgct
gctgtaaagcctaaattggtaccgccgtatatgaagcggtcgggttttgttccgaggaag
gttgaagattttggggaaggtggagcttttccggagattcatgtggcgcagtatccgctt
gatatgggaaggaataaggcggctaaaccaggttcggcgatacttccggtgacggttgat
gcacatggtaaagttgcttatgatgctattgtgaaacagaatgagaatgctaagaaaatt
gtttatactcagcataaagatttgatacctaagattttgagaaacgatgaggatggtgaa
atgagtgatgttgatgatgatgaggctcagcgggagatcgatgaaacgatgcaggaaaca
aaagctgcacttgagaagattgttaatgtcaggcttagtgcggcacagccgaagaatgtg
ccgcagcataattctgatgctaagtatataaagtataaaccttcgcaacagaatgctgct
tttaattcgggtgcgagggagagggttattaggatggttgagatgcccgtggatccactt
gagccaccgaaattcaagcataagcgtgttcctaaggcttccggttcacctcctgtgccg
gtgatgcattcgcctcctaggcctgttactgtgaaagatcagcaggattggaagatacct
ccttgtatttcgaattggaagaatcctaagggttacactattcctcttgataagcggttg
gctgctgatggtagaggtcttcaggaggttcagattaatgataattttgcgaagctttct
gaggctttgtatgttgcagagcagaaggctagagaagctgttgctatgaggtctaaagtt
cagaaggaaatgctgttgaaggagaaggaaaggaaggaacaggagctgagggctttggct
cagaaagcgcgggcagatagaattggtgtcccccctccccctgctgctgttcctcttgtt
tcggaaagaagtggtgtggatgatggtgacatgagtgttgagtatgagcataggggtagg
gacagggatagggaaagggaaagggaaaaggactatcccaaggagagtagggtagaaaga
gaggagcggctgaaacgtgagaagattcgtgaggaaaggcgaaaggagagggagagggag
agaaggttagaggctaaggatgctgccatgggaaagaagagcaagattactagagatagg
gatcgtgatataagtgagaaagttgctcttggtttggcgtctactaagcaagggacagag
gttatgtatgatgaaaggctattcaaccaggataaaggaatgtcttctggatttgccact
gatgatcagtataatgtttatgacaaaggcttgttcactgcacagccaacactttccact
ctgtacagaccgaagaaggatgttgataatgaaacttatggaggtgcagatgagcagctg
gagaagattatgaagactgatcgctttaagcccgacaaaggatttacaggggcttccgaa
agggcacctccaagggatagaccggtcgagtttgagagcgaagaagctgatccatttggt
cttgatcagttcttgaccgaggtcaaaaagggtaagaaggccttggacaacgtaggtggt
ggtggaacgatgagagccagcgcaggatcttcgatgcgagacagttctgatggaggttcg
ggcagaactcgcatcgggttcgagaggggccgttaa
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