Trifolium pratense (red clover): 123898326
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Entry
123898326 CDS
T08949
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22A-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123898326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123898326
Spliceosome [BR:
tpra03041
]
Common components
Common spliceosomal components
SR proteins
123898326
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
123898326
NCBI-ProteinID:
XP_045805209
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All DBs
Position
LG7:complement(4218651..4220858)
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AA seq
197 aa
AA seq
DB search
MTRVYIGNLDSRISERDLEDDFHVFGVIRSVWVARRPPGYAFIDFDDRRDALDAIRELDG
KNGWRVELSHNSKSGSGGGGRGGGGGGRGRSGGGGSDLKCYECGEPGHFARECHSSRGGS
GRRRSRSPPRLRRSPSYGRRSYSPRERSPRRRSPSPRRRSPSPRRRSYSRSPPPYRAREG
VTQANGNGIRDAHRSRS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgtctatattggaaatcttgattcgcgaatttctgaaagggatcttgaagat
gattttcatgtttttggagttatacgaagcgtttgggttgcaaggaggccacctggttat
gctttcattgattttgatgaccgcagagatgcgctcgatgctatccgtgaattagatggt
aaaaatggttggagggtagagctttctcacaactctaaaagtgggagtggagggggaggc
agaggtggtggcggtggtggtcgtggtcggtctggtgggggcggttctgatttgaaatgt
tatgagtgtggtgaacctggtcattttgcacgggagtgtcattcttcccgtggtggttct
ggaagacgtcggagccgtagtccgcctcgattgcgcaggagcccaagttatgggcgaagg
agctacagtcctcgtgagcggtcccctaggcggcgcagcccttctcctcgtcgacgcagt
ccttcaccacgtcgccgcagctatagcaggtcaccacctccttaccgtgcccgtgagggg
gtaacacaagctaacggaaatgggataagggatgcacatcggagcagaagttga
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