Trifolium pratense (red clover): 123898479
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Entry
123898479 CDS
T08949
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03420
Nucleotide excision repair
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123898479
09124 Replication and repair
03420 Nucleotide excision repair
123898479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123898479
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123898479
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123898479
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
123898479
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123898479
TCR (transcription coupled repair) factors
Cul4-CSA complex
123898479
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123898479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
123898479
NCBI-ProteinID:
XP_045805403
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All DBs
Position
LG7:35452017..35465783
Genome browser
AA seq
787 aa
AA seq
DB search
MSLPTKRSVGATSIPMKKAKSHDDDDDAVLDHSSLDHDLKPNPLSSSNSMAANLSRKKAT
PPQPSQPAKKLLIKLTKGKPKIPPNFEEQTWATLKSAICAIFFKQPNSCDLEKLYQAVED
LCIHKMGGNLYQRIEKECEVHISAALQALVGQSPDLVVFLSLVERCWQDHCDQMLMIRDI
ALFLDRTYVKQNSSIRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIDSERLGEAVDRT
LLNHLLKMFTALGIYAESFEKPFLDCTSEFYAAEGVKYMQQSDVPDYLKHVETRLQEEHE
RCLIYLDASTKKSLIQTTEAQLLERHIPAILDKGFSVLMDGNRIEDLQRMHSLFSRVNAL
ESLKQALSSYIRRTGQGIVMDEEKDKDMVQSLLEFKAALDTTWEESFAKNEAFGNTIKDA
FEHLINLRQNRPAELIAKFLDDKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFY
KKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFRQSSQ
ARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNS
LGHCVLKADFPKGKKELAVSLFQTVVLMQFNDAEKLSFQDIKDSTAIEDKELRRTLQSLA
CGKVRVLQKMPKGRDVEDEDSFVFNDTFTAPLYRIKVNAIQLKETVEENTNTTERVFQDR
QYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNP
QVYNYLA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccctacaaaacgttcagtcggcgctacttcaatccctatgaaaaaagctaag
tcacacgacgacgacgacgacgccgttttggaccattcttctctcgaccacgatctcaaa
cctaatcctctttcttcctctaactccatggctgctaatctctctcgcaagaaagctact
cctcctcaaccttctcaacccgctaaaaaattactcatcaagctcaccaaaggtaagcca
aagatacctcctaattttgaggagcagacatgggcaacactaaagtctgctatatgtgct
atattttttaagcaacctaactcctgtgacttggagaagctttatcaggccgtcgaagat
ctttgcattcataaaatgggtggaaatctttatcaacggattgaaaaggagtgtgaagta
cacatatctgcagcactgcaggctttggtcggacaaagcccggatttggttgtatttcta
tctctagttgaaagatgttggcaggatcattgtgatcaaatgctgatgattcgtgatata
gccttgtttctggataggacatatgtgaagcaaaattcaagtatacggtcattatgggac
atgggcctacaactttttcggaaacatctttcactgtctcctgaagttcaacacaaaact
gttactggtcttctacgaatgatcgacagtgaaagattaggggaagcagtggatagaact
cttctaaatcatcttttaaagatgtttactgctttgggaatttatgcagaaagctttgag
aagccattccttgattgtacatctgaattttatgccgctgaaggtgtgaaatacatgcag
caatcagatgttccagattacttgaagcatgtggagacaagattgcaagaggaacatgaa
agatgtttgatctacttggatgcaagtactaagaagtcattgatacaaacaacagaagca
caacttcttgaacgtcatatacctgccattcttgataagggtttctctgtgcttatggat
ggaaatcgtattgaagaccttcaaagaatgcactcactcttttcaagggtcaatgccctc
gagtcactgaagcaggcccttagttcatacatcaggagaactgggcagggcattgttatg
gatgaggagaaagacaaagacatggttcaatcccttcttgaatttaaggctgctcttgac
acaacatgggaagaaagctttgccaagaatgaagcattcggtaacaccattaaagatgca
tttgagcatcttatcaatctccgtcagaaccgacctgcagagttaattgccaagtttttg
gatgataaacttcgtgcgggtaataagggtacttcagaagaggaattagagggcactctt
gataaagtcctggttttattcaggttcattcagggtaaggatgtgtttgaggcattttat
aagaaagatcttgctaaaagactactgttaggaaagagtgcttctattgacgcggagaaa
tccatgatctccaagttgaagactgagtgtggtagccagtttacaaacaaactggaagga
atgtttaaggacattgaattatcaaaagaaataaacgagtccttcagacagtcatcccag
gcgagaacaaaactcccatctgggattgaaatgagtgttcatgtcttgactactgggtac
tggccaacctatccacccatggatgtcagacttcctcatgaattaaatgtttatcaggat
atttttaaagagttctatttaagcaaatacagtggaaggcgtctcatgtggcaaaattct
ttaggtcactgtgtcctaaaggcagattttccgaaagggaaaaaggaattggctgtctcc
ctatttcagactgttgttctgatgcaattcaatgatgctgagaaactaagctttcaagat
atcaaggattctactgctattgaagacaaggaactgagaaggactctgcaatcacttgca
tgtggaaaagttcgtgttctgcaaaagatgccaaagggtagagatgttgaagatgaagat
tcgtttgtttttaatgatacatttaccgcccctctttaccgtataaaggtgaatgcaatt
cagttgaaggagacagtggaggagaacacaaacaccacagaaagagttttccaagatcgt
caatatcaggttgatgctgctattgtgaggataatgaagactaggaaagtgcttagtcac
acacttcttattactgaacttttccaacagctcaaatttcctattaaaccagctgatttg
aagaaaaggattgaaagcctgatcgacagagagtatctggagagggacaagagcaaccct
caagtatacaattacttggcatag
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