Trifolium pratense (red clover): 123898936
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Entry
123898936 CDS
T08949
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123898936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123898936
Spliceosome [BR:
tpra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123898936
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
123898936
NCBI-ProteinID:
XP_045805936
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Position
LG7:52472741..52475780
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AA seq
631 aa
AA seq
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MDVIPDRRKRVRHSEGDRHHRSDRNAKRHRKTRDNKVYDRDEREGTKVRSKLKRDEEMED
DCDNNASPQNGVAMGSPAAVSASVPDSTLVPPPSFPIKVSSISTTNENKGVSFTMSHEVT
GKFSTDGSSSIAGKPGSLSIHALAKAKKVLQMQKALSEKLKRIPHVNPPASGISAAGVTT
ADVTIPQKPTKAHVLRLDAHGREIDEHGNVVNVTKPSNLSTLKVNINKQKIDAFEILKPV
LDFDPDSNSHFDESIGINKTKLMRPKRTNFLFVEEGKWSKDAESIKLKSKFGEAQAKEQK
AKQAQLAKAKAAPDINPNLIEITERDVMKEKLKDPIPEVEWWDVALLHSGNYGDIDNRTV
DEDKLKMEKITFYVEHVRPIEPPAELAPPPPQPLKLTKQEQKKLKTQRRIAKEKERQEMI
RQGVIEPPKPKLKMNNLMKVLGTEATQDPTRLEKEVRIAAAEREQAHIDRNIARKLTPAE
QREKKKRKLFDDSNTPDRLVALYRINDLSHPQTRIKVDRNAQYNELTGCAVIYDGISVVV
VEGKSKTIERYGKLMLRRINWSEKEETEDSNDDKPANKCVLVWQGNVAKQNFNKFSVHDC
ITEAAARKVFVNAGVPHYWDHAVNYEDDDAA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcatccccgataggcgaaagagagttcgacattccgaaggtgaccgccatcat
cgatctgaccggaatgccaaacgccaccgcaaaaccagggataataaggtatacgacagg
gacgaaagagagggtacgaaagttaggtctaaattgaagcgcgatgaagagatggaagat
gattgcgacaacaatgcatcaccacaaaacggtgttgctatgggatcacctgctgcggtg
tctgctagtgtgccagactcaactttggtccctcctccttcctttcctattaaggtatca
tcgatttctaccacaaatgaaaataagggtgttagttttaccatgtctcatgaggttact
ggaaaatttagtacagatggatcctcttcaattgctggaaaacctggaagcctctctatt
catgccttagctaaggcaaagaaggttttacaaatgcaaaaagctttgtcggagaaactc
aagagaattcctcatgtaaatcctccagctagtggcattagtgctgctggtgtcacaact
gcagatgttactatccctcagaaaccaaccaaggctcatgttcttcgtcttgacgcccat
ggacgggaaatagatgaacatgggaatgttgttaatgtaactaagccaagcaaccttagc
acattaaaggtcaacattaataaacagaagatagatgcatttgaaatactaaaacctgtg
ttggattttgatcctgattctaactctcattttgacgagagtattggcatcaacaaaaca
aagctcatgcgccccaagaggacaaattttctgtttgtggaggaaggaaaatggtcaaaa
gatgctgaatcaataaagttgaagagtaaatttggagaagctcaagcaaaagagcagaag
gccaaacaagcacagctagcaaaggcaaaagctgctcctgatataaatccgaacttaata
gaaattacagagagagatgtaatgaaagaaaagctgaaggatccaattccagaagttgag
tggtgggacgtggcacttttgcattctggaaattatggtgacattgacaacagaactgta
gacgaagataaactgaaaatggaaaaaatcaccttttatgtggagcatgttcgccccatt
gaaccgcctgctgagcttgcccctccaccacctcaacctctcaagctaaccaaacaggag
caaaagaaactcaagacccaaaggcgtatagctaaggagaaggagcgacaagagatgatt
agacagggtgtcatagaaccgccaaaaccaaagttaaagatgaacaatttaatgaaagtg
ctcgggaccgaagcaactcaagatcccactcggcttgagaaggaagtacgtattgcagct
gctgagcgtgagcaggctcacatcgataggaatattgcacgcaagcttactcctgccgag
cagcgtgagaagaagaaaaggaagctgtttgatgactcaaatacaccggatagacttgtg
gcactttacaggattaacgacctctctcatccacagactcgcataaaagttgatcgtaac
gctcaatataatgagttgaccggatgtgctgtgatttacgatggtattagcgttgtcgta
gttgaaggtaaaagcaagacaattgagaggtatggaaaactaatgctcagacgtatcaat
tggagtgagaaagaagaaaccgaagattcaaatgatgacaagcctgccaacaagtgtgtt
ctggtgtggcaaggaaatgttgccaaacaaaacttcaataagttcagtgttcatgattgc
atcactgaagcagctgctcggaaagtgttcgtgaatgctggcgttcctcattattgggac
catgctgtcaactatgaagatgacgatgctgcttga
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