Trifolium pratense (red clover): 123899033
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Entry
123899033 CDS
T08949
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123899033
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
123899033
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
123899033
NCBI-ProteinID:
XP_045806044
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Position
LG7:complement(57686481..57690922)
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AA seq
404 aa
AA seq
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MFHTMECFFKLLVIMSMLKLGLSITTTFNVLHYGAVGDGKTNDSPAFLKAWKDVCQSKST
TSHLIIPAAKTFLLRPITFSGPCKSNYIYIELSGNIVAPQTKSEYSGSHLNTWIGFSFIN
GLIINGKGTIDGRGSMWWKQPCIGNPSPGTTCRPPTAITLNRCYRFQIKGYKSINPARSH
ITLTSCKKGIISNIRLIAPGESPNTDGIDISSSRDIQVLNSFIGTGDDCIAISAGSSVIK
ITGITCGPGHGISIGSLGARGESDIVEDVHVKNCTLTETLTGVRIKTKQGGGGFARRITF
ENIRFIRAHNPIMIDQFYCVNQMVCKNETKAIKISDVTYRGISGTSLTDKAINLNCDQNV
GCSNLVFDRVYVRSAVPKMKVFSFCHNAHGRASHTKPILNCLLK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatacaatggagtgttttttcaaattgttagtgattatgagtatgcttaaactc
ggattgagtatcacaacaactttcaatgtgttgcattatggagcagttggagatggaaaa
accaatgattcccctgcctttctaaaagcatggaaagatgtgtgtcagagcaagtcaacc
acatctcatttgatcataccagcagccaagacatttttattgaggccaataacatttagt
ggtccatgtaaatctaattatatttacattgagctttcaggaaacattgttgcacctcaa
acaaaatcagaatattcaggatcacatttaaacacatggattggcttctcatttatcaat
ggtttaattatcaatggaaaaggaacaattgatggtagaggttctatgtggtggaaacaa
ccttgcataggaaatccatcacctgggacaacttgccgtccaccaacagcaataacattg
aatagatgctatcggtttcaaataaaaggatataaaagtattaatccagcaagaagccat
ataactctaacaagctgcaaaaaaggcattatctctaacattcgtctaattgctcctgga
gaaagtcctaatactgatggcatcgatatctcttcctcaagagacattcaagtacttaac
tctttcattggaacaggtgatgattgcattgctattagtgctggatcatcagtaatcaaa
attactggtataacatgtggtccaggacatggtataagcattggatcattgggggcacgt
ggagagagcgatattgtagaggatgtgcatgtgaaaaattgtacattgactgaaacatta
actggagtaaggatcaagacaaagcagggtggaggtggatttgctaggaggatcacattt
gaaaatattagatttattagagcccataatcctattatgattgaccaattttattgtgtt
aatcagatggtctgcaaaaacgagactaaagcaatcaagattagtgatgtaacttataga
gggattagtggaacatcattgacagacaaggcaataaatttgaactgtgaccagaatgtt
gggtgttccaaccttgtgtttgatcgtgtttatgtaagatctgctgttcctaagatgaag
gttttctccttctgccataatgctcatggaagagcatcacacaccaaaccaattctaaat
tgcttgctcaagtag
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