Trifolium pratense (red clover): 123899117
Help
Entry
123899117 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123899117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123899117
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123899117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_16
AAA_22
AAA
AAA_18
AAA_30
ABC2_membrane_3
RsgA_GTPase
ABC_trans_N
AAA_23
Rad17
AAA_25
AAA_28
NTPase_1
NACHT
nSTAND3
T2SSE
RuvB_N
AAA_19
cobW
AAA_5
AAA_11
Rrf2
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
123899117
NCBI-ProteinID:
XP_045806138
LinkDB
All DBs
Position
LG7:complement(57408615..57416242)
Genome browser
AA seq
1464 aa
AA seq
DB search
MEGTDIFRATNSLRAQSSTLWRNSGVEVFSKSTREEDDEEALKWAALEKLPTYSRLRKGL
LTTSHGAANEIDVTDLAFQEKQKLLERLVKVAEEDNERFLLKVKERVDRVGLDIPTIEVR
YQNLKIDAEAFVGGRALPSFINAATNVIEVRRYQYYSTSSNDSRFFFLRSVLVLMLSLTS
QNLTLFQGLLNVLHIIPSKKKHVAILKDVSGIVKPRRMTLLLGPPGSGKTTLLLALSGKL
DKSLQVSGSVTYNGHGLNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDM
LSELSRREKAANIKPDPDIDVYMKAISTEGQEYSISTDYVLKILGLDICADTMVGDEMLR
GISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVSSLRQYVHIMNGTAVISLL
QPAPETYDLFDDIILISDGQVVYHGPREYVLDFFESMGFKCPERKGVADFLQEVTSKKDQ
AQYWVRRDQPYRFVTVTQFAEAFQSFHIGRKLAEELSVPFDKTKSHPAALTTKEYGLNKT
ELLKANFAREYLLMKRNSFVYIFKLSQLFVMALIAMTLFFRTEMHRDNQDQAGVYAGALF
FTLVTIMFNGMSEISMTIAKLPVFYKQRDLLFYPSWAYAIPSWILKIPITIFEVSLWVFL
TYYVIGFDPNVGRFFKQWLVLFFMSQMASALFRATAALGRNMIVANTFGSFAVLTLLALG
GFILSRKDIKGWWIWGYWISPLMYGQNALMANEFLGNSWHNATSELGKNYLDARGFFPHA
YWYWIGVGALAGFVFLLNALFGLALDILGPFDKPSATVPEDSEDDLSIVQEVELPRIESS
GRGDSVTESSHGKKKGMVLPFEPHSITFDDIVYSVDMPAEMKEQGVTEDRLVLLKGVSGA
FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGDIKVSGYPKKQETFARISGYCEQND
IHSPHVTVYESLLYSAWLRLPAGVDTKTREMFIEEVMDLVELNSLRNSLVGLPGVSGLST
EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSID
IFEAFDELFLMKRGGQEIYVGPLGRHSTHLIKYFESVDGVSKIKDGYNPATWMLEVTTTA
QELNLGVDFTEYYKNSDLYRRNKQLIQELGQPAPGSKDLHFASQFSQSFLVQCQACLWKQ
RWSYWRNPPYTAVRFFFTTFIGIMFGTMFWDLGGKHNNRQDLLNAVGSMYTAVLFLGVQN
SSSVQPVVAVERTVFYREKAAGMYSALPYAFSQILVELPYVFAQAVTYGVIVYAMIGFDW
TAEKFFWYLFFMYFTLLYFTFYGMMAVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPSI
PIWWRWYYWACPVAWTIYGLVASQFGDITTFMTAEEKDVKTFLDDYFGIKHDFIGECAIV
VGGIAVAFAVIFAVAIKTFNFQKR
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaactgatatatttagagctactaatagtttaagagctcaaagttcaacttta
tggagaaacagtggagttgaagttttctcaaaatcaactcgtgaagaagatgatgaagaa
gctcttaaatgggctgcacttgaaaagctacctacttatagccgtttgagaaaagggttg
ttgacaacttctcatggtgctgctaatgagattgatgttactgatcttgcttttcaagaa
aaacagaaacttttggagaggttggttaaggttgctgaagaagataatgaaaggtttctg
ttgaaagtcaaggaaagagttgatagagttggacttgatattccaacaattgaagttcga
tatcagaacctgaaaattgatgctgaagcttttgtgggaggtagagctttgcctagtttc
atcaacgctgctactaatgttatagaggtaaggagataccaatattatagtacttcatca
aatgattcaagatttttctttcttagatctgttttggttttgatgttgagtctcacaagt
caaaatctaactttgtttcagggtttattgaatgttcttcatattatcccaagcaaaaag
aagcatgtggcaattcttaaagatgttagtggaattgttaaacctcgtaggatgacacta
cttttaggtcctcctggttcaggaaagaccacattgcttttagctttatcaggaaagctt
gataaaagtcttcaggtatctgggagtgtgacttacaatggacatggattgaacgagttt
gtacctcaaagaactgctgcatatatcagccagcatgatgttcatatcggagaaatgact
gtgagggaaaccttggctttttcagcaaggtgccaaggagttggatcacgttacgacatg
ctatctgagttgtctagaagagagaaagcagcaaatatcaagcctgacccagatattgat
gtctacatgaaggcaatttcaaccgaaggtcaggagtatagcatttcaacagattatgta
ctcaagattttggggttggatatatgtgctgatactatggtgggggatgaaatgttgcgt
ggtatctctggaggacaaaggaagcgtgtcactacaggagagatgttggttggaccggcc
aatgcattgttcatggatgaaatttctactgggctggacagttccacaacttttcagatt
gtgagctctctgaggcaatatgtccacattatgaatggaactgcagtcatatcactgctt
cagccagcacctgagacatatgatctttttgatgatattatcttaatctctgatggccaa
gttgtgtaccatggcccccgtgaatatgttctggacttttttgaatctatgggtttcaaa
tgtcctgaaaggaaaggtgttgctgactttcttcaagaagttacatcgaaaaaggatcaa
gcacagtactgggtgcgcagagaccaaccatacagatttgttaccgttactcaattcgct
gaggcctttcaatcattccatattggtaggaaacttgccgaggaactttccgttccattt
gacaagacaaagagccatccagctgctttgacaaccaaagagtatggtcttaataagact
gagcttttaaaggctaacttcgcaagagagtacttgctcatgaaaaggaattcatttgtt
tacatcttcaagctatctcagcttttcgtcatggctttgatagcaatgacactatttttt
cggactgagatgcatcgcgataatcaggatcaagcgggtgtttatgctggtgctttgttt
ttcacactagtgacgattatgttcaatggaatgtctgagatttctatgacgatcgctaaa
cttcctgttttctacaagcaacgagaccttctattctatccttcatgggcatatgctatt
ccttcgtggattctcaagattcctattacaatatttgaagtttctctatgggtgtttctt
acctactatgtcattggatttgatccaaatgttggcaggtttttcaagcagtggcttgta
ctgtttttcatgagtcagatggcttctgcattgttccgagccaccgcagccctgggtaga
aacatgattgtagccaacacatttggatcatttgcagttctcacacttcttgcattgggt
ggcttcattctctcaagaaaggatatcaaaggctggtggatttggggttactggatctca
cctttgatgtatgggcagaatgctttgatggccaatgaatttcttgggaacagttggcac
aatgctacttctgaattgggaaaaaattatctcgatgcccgtgggttcttcccacatgca
tattggtattggataggcgtcggggcattggctggatttgtgttccttctcaatgcgttg
tttggtttggctctcgatatactaggcccatttgataagcctagtgcaacagtacctgaa
gattcagaagatgatttatcgatcgtacaagaagttgaattaccacgcatagaaagttca
ggaagaggagattctgttacagagtccagccatggaaagaagaaaggaatggttcttcca
tttgaaccacattctatcacttttgatgacattgtatactctgttgacatgccagcggaa
atgaaagagcaaggtgtgacagaggacagattagtgcttctgaagggtgttagtggtgca
ttcaggcctggtgtgctcacagctctgatgggtgtaagtggagctggtaagacaactttg
atggatgttctggctggtaggaaaaccggtggatatattgatggagacataaaggtttca
ggataccctaaaaagcaagaaacatttgctagaatctctggctactgtgagcagaatgat
atccattcacctcatgttacagtttatgaatctcttctttactcagcatggcttcgttta
cctgctggagttgataccaagaccagagagatgttcattgaggaagtcatggatctggtg
gagttgaactcattgagaaactccttggttggtttgcctggtgtgagtggtctctcaacc
gaacaacgcaagaggctgactattgcagttgaactagtggctaatccatctataattttc
atggatgagcctacttctggtttagatgctagagctgctgcaattgttatgagaaccgtt
aggaacacagtggacacaggaagaacagttgtgtgtaccatccatcagcctagcattgac
atatttgaagcatttgatgagctattccttatgaagcgtggaggacaagaaatatatgtt
ggaccactgggacgtcattctactcacttgatcaagtattttgagagcgttgacggggtg
agtaaaatcaaagatggatataacccagcaacatggatgttggaagttacaactacagca
caagaacttaatttgggtgttgattttactgagtattacaaaaattcagatctatatagg
agaaacaagcaacttatacaagaacttggccagcctgctcccggttcaaaggatcttcat
ttcgctagtcaattttcgcagtctttcttggtccaatgccaggcatgcttatggaagcaa
cgttggtcatattggcgtaatccgccatacactgctgtgaggtttttcttcactacattc
ataggcataatgtttggaacaatgttctgggatcttggtggcaaacacaataatagacaa
gacctgttgaacgctgtgggttcaatgtatactgctgttctcttccttggagtacaaaat
tcttcttctgtgcagccagttgttgcggttgaaagaactgtgttttatcgagaaaaagct
gctggaatgtattcagccttaccctatgcattttcacagattttggtagagctaccttat
gtctttgctcaagccgtgacatacggagtcatagtctacgctatgatcggatttgactgg
acagcagagaaattcttttggtatctattcttcatgtacttcacattgctctactttacc
ttctatggtatgatggctgtggcagtgacaccaaatcaccatgttgcttctattgtggct
gctgcattttatgcaatttggaacctcttttcaggatttgtcgtcccaagacctagcatt
ccgatttggtggagatggtactactgggcttgtccagttgcatggaccatctatggattg
gttgcatctcaatttggagatataactacttttatgaccgcagaagaaaaagatgtgaaa
actttccttgacgactattttggtatcaaacacgacttcataggagagtgtgcaattgtg
gttggtggaatcgctgttgcctttgcagttattttcgctgttgcaatcaagacctttaac
ttccaaaagagatag
DBGET
integrated database retrieval system
