Trifolium pratense (red clover): 123899118
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Entry
123899118 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123899118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123899118
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123899118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_16
AAA_22
AAA_18
AAA
AAA_30
RsgA_GTPase
AAA_23
Rad17
AAA_25
ABC2_membrane_3
ABC_trans_N
AAA_28
nSTAND3
NTPase_1
NACHT
T2SSE
RuvB_N
AAA_19
cobW
AAA_11
AAA_5
Rrf2
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
123899118
NCBI-ProteinID:
XP_045806140
LinkDB
All DBs
Position
LG7:complement(57419555..57427181)
Genome browser
AA seq
1463 aa
AA seq
DB search
MEGTDIYRATNSLRARSSTVWRNSGVEVFSKSSREEDDEEALKWAALEKLPTYNRLRKGL
LTTSHGAANEIDVTDLAFQEKQKLLDRLVKVAEEDNEGFLLKVKERVDRVGLDIPTIEVR
YQNLKIDAEAFVGGRALPSFINAATNVIEVRRYRYYSTSSNDSRYFFLRSVLLLMLSLTS
QNLTLFQGLLNVLHIIPSKKKHVAILKDVSGIVKPRRMTLLLGPPGSGKTTLLLALSGKL
DKSLQVSGSVTYNGHGLNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDM
LSELSRREKAANIKPDPDVDVYMKAISTEGQEYSISTDYVLKILGLDICADTMVGDEMLR
GISGGQRKRVTTGEMLVGPANALFMDEISTGLDSSTTFQIVSSLRQYVHIMNGTAVISLL
QPAPETYDLFDDIILISDGQVVYHGPREYVLDFFESMGFKCPERKGVADFLQEVTSKKDQ
AQYWVRRDQPYRFVTVTQFAEAFQSFHIGRKLAEELSVPFDKTKSHPAALTTKEYGLNKT
ELLKANFAREYLLMKRNSFVYIFKLSQLFVMALIAMTLFFRTEMHRDNQDQAGTYAGALF
FTLVTIMFNGMSEISMTIAKLPVFYKQRDLLFYPSWAYAIPSWILKIPITILEVSLWVFL
TYYVIGFDPNVGRFFKQWLVLFFMSQMASALFRATAALGRNMIVANTFGSFAVLTLLALG
GFILSRKDIKGWWIWGYWISPLMYGQNALMANEFLGNSWHNATFDLGKTYLDARGFFPHA
YWYWIGVGALAGFVFLLNALFGFALDILGPFDKPSATVPVEEDDSSNLREVELPRIESSG
RGDSVTESSHGKKKGMVLPFEPHSITFDDIVYSVDMPAEMKEQGVTEDRLVLLKGVSGAF
RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGDIKVSGYPKKQETFARISGYCEQNDI
HSPHVTVYESLLYSAWLRLPAGVDTKTREMFIEEVMDLVELNSLRNSLVGLPGVSGLSTE
QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI
FEAFDELFLMKRGGQEIYVGPLGRHSTHLIKYFESVDGVSKIKDGYNPATWMLEVTTTAQ
ELNLGLDFTEYYKNSDLYRRNKQLIQELGQPAPGSKDLHFASQFSQSFLVQCQACLWKQR
WSYWRNPPYTAVRFFFTTFIGIMFGTMFWDLGGKHNNRQDLLNAVGSMYTAVLFLGVQNS
SSVQPVVAVERTVFYREKAAGMYSALPYAFSQILVELPYVFAQAVTYGVIVYAMIGFDWT
AEKFFWYLFFMYFTLLYFTFYGMMAVAVTPNHHVAAIVAAAFYAIWNLFSGFVVPRPAIP
IWWRWYYWACPVAWTIYGLVASQFGDITTFMPQEGKDVKTFLDDFFGIKHNFIGECAIVV
GGIAVAFAVIFAVAIKTFNFQKR
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaactgatatatatagagctactaatagtttaagagctcgaagttcaactgta
tggagaaacagtggagttgaagttttctcaaaatcatctcgtgaagaagatgatgaagaa
gcacttaaatgggctgcacttgaaaaattacctacttataaccgtttgagaaaagggttg
ttaacaacttctcatggtgctgctaatgagattgatgttactgatcttgcttttcaagaa
aaacagaaacttttggataggttggttaaggttgctgaagaagataatgaagggtttttg
ttgaaagtcaaggaaagagttgatagagttggacttgatattccaacaattgaagttcga
tatcagaacctgaaaattgatgctgaagcttttgtgggaggtagagctttgcctagtttc
atcaacgctgctactaatgttatagaggtaaggagataccgatattatagtacttcatca
aatgattcaagatatttctttcttagatctgttttgcttttgatgttgagtctcacaagt
caaaatctaactttgtttcagggtttattgaatgttcttcatattatcccaagcaaaaag
aagcatgtggcaattcttaaagatgttagtggaattgttaaacctcgcaggatgacacta
cttttaggtcctcctggttcaggaaagaccacattgcttttagctttatcaggaaagctt
gataaaagtcttcaggtatctgggagtgtgacttacaatggacatggattgaacgagttt
gtacctcaaagaactgctgcatatatcagccagcatgatgttcatattggagaaatgact
gtgagggaaaccttggctttttcagcaaggtgccaaggagttggatcacgttacgacatg
ctatctgagttgtctagaagagagaaagcagcaaatatcaagcctgacccagatgttgat
gtctacatgaaggcgatttcaaccgaaggtcaggagtatagcatttcaacagattatgta
ctcaagattttggggttggatatatgtgctgatactatggtgggggatgaaatgttgcgt
ggtatctctggaggacaaaggaaacgtgtcactacaggagagatgttggttggaccagca
aatgcattgttcatggacgaaatttctactgggctggacagttccacaacttttcagatt
gtgagctctctgaggcaatatgtccacattatgaatggaactgcagtcatatcactgctt
cagccagcacctgagacttatgatctttttgatgatattatcttaatctctgatggccaa
gttgtgtaccatggcccccgtgaatatgttctggacttttttgaatctatgggtttcaaa
tgtcctgaaaggaaaggtgttgctgactttcttcaagaagttacatcgaaaaaggatcaa
gcacagtactgggtgcgcagagaccaaccatacagatttgtaaccgttactcaattcgct
gaggcctttcaatcattccatattggtaggaaacttgccgaggaactttctgttccattt
gacaagacaaagagccatccagctgctttgacaaccaaagagtatggtcttaataagact
gagcttttaaaggctaacttcgcaagagagtacttgctcatgaaaaggaattcatttgtt
tacatcttcaagctatctcagcttttcgtcatggctttgatagcaatgacactatttttt
cggactgagatgcatcgcgataatcaggatcaagcgggtacttatgctggtgctttgttt
ttcacactagtgacgattatgttcaatggaatgtctgagatttctatgacgatcgctaaa
ctccctgttttctacaagcaacgagaccttctattttatccttcatgggcatatgctatt
ccttcgtggattctcaagattcccattacaatattagaagtttctctttgggtgtttctt
acctattatgttattggatttgatccaaatgttggcaggtttttcaagcagtggcttgta
ctgtttttcatgagtcagatggcttctgcattgttccgagccaccgcagccctgggtaga
aacatgattgtagccaacacgtttgggtcatttgcagttctcacacttcttgcattgggt
ggcttcattctctcaagaaaggatatcaaaggctggtggatttggggttactggatctca
cctttgatgtatgggcagaatgctttgatggccaatgaatttcttgggaacagttggcac
aatgctacttttgatttgggaaaaacatatctcgatgcccgtgggttcttcccacatgca
tattggtattggataggcgtcggggcattggctggatttgtgttccttctcaacgcgttg
tttggtttcgctcttgatatactaggcccatttgataagcctagtgcaacagtacctgta
gaagaagacgattcatctaacttacgagaagttgaattaccacgcatagaaagttcagga
agaggagattctgttacagagtccagccatggaaagaagaaaggaatggttcttccattt
gaaccacattctatcacttttgatgatattgtatactctgttgacatgccagcggaaatg
aaagagcaaggtgtgacagaggacagattagtgcttttgaagggtgttagtggcgcattc
aggcctggtgttcttacagctctgatgggtgtaagtggagctggtaagacaactttgatg
gatgttctggctggtaggaaaaccggtggatatattgatggagacataaaggtttcagga
taccctaaaaagcaagaaacatttgctagaatctctggctactgcgagcagaatgatatc
cattcacctcatgttacagtttatgaatctcttctttactcggcatggcttcgtttacct
gcgggagttgataccaagaccagagagatgttcattgaggaagtcatggacctggtggag
ttgaactcattgagaaactccttggttggtttgcctggtgtgagtggtctctcaaccgaa
caacgcaagaggctgactattgcagttgaactagtggctaatccatccataattttcatg
gatgagcctacttctggtttagatgctagagctgctgcaattgttatgagaaccgtaagg
aacacagtggacacaggaagaacagttgtgtgtaccatccatcagcctagcattgacata
tttgaagcatttgatgagctattccttatgaaacgtggaggacaagaaatatacgttgga
ccactgggacgtcattctactcatttgatcaagtatttcgagagcgttgacggggtgagt
aaaatcaaagatggatataacccagcaacatggatgttggaagttacaactaccgcacaa
gaacttaatttgggtcttgattttaccgagtattacaaaaattcagatttatataggaga
aacaagcaacttatacaagaacttggccagccggctcccggttcaaaggatcttcatttc
gctagtcaattttcgcagtctttcttggtccaatgccaggcatgcttatggaagcaacgt
tggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcactacattcata
ggcataatgtttggaacaatgttctgggatcttggtggcaaacacaataatagacaagac
ctgttgaacgctgtgggttcaatgtatactgctgttctcttccttggagtacaaaattca
tcttccgtgcagccagttgttgcagttgaaagaactgtgttttatcgagaaaaagctgct
ggaatgtattctgccttaccctatgcattttcacagattttggtagagctaccttatgtc
tttgctcaagctgtgacatacggagtcatagtctacgctatgatcggatttgactggaca
gcagagaaattcttttggtatctattcttcatgtacttcacattgctctactttaccttc
tatggtatgatggctgtggcagtgacaccaaatcaccatgttgctgctattgtggctgct
gcattttatgcaatttggaacctcttttcaggatttgtcgtcccaagacctgccattcca
atttggtggagatggtactactgggcatgtccagttgcatggaccatctatggattggtt
gcatctcaatttggagatataactacttttatgccccaagaaggaaaagatgtgaaaact
ttccttgacgacttttttggtatcaaacacaacttcataggagagtgtgcaattgtggtc
ggtggaatcgctgttgcctttgcagttattttcgctgttgcaatcaagacctttaacttc
caaaagagatag
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integrated database retrieval system
