Trifolium pratense (red clover): 123899120
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Entry
123899120 CDS
T08949
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123899120
Enzymes [BR:
tpra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
123899120
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123899120
Prokaryotic type
123899120
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
123899120
NCBI-ProteinID:
XP_045806143
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Position
LG7:47964945..47967500
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AA seq
535 aa
AA seq
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MENSDKTPTSSSPPRSPSLAAEESESKKLKMSTTTSDDEQCTTAEGTKIRYKRRKVAIFF
AYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGFIDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDP
CCHRDRETVLASLGSENELVKCLECSERGRKVEGLFGNSKRNLEQEAVDVETDGSSNRTA
VVNSGVAENVEVSLSKGDDSRLNKESINDNEGKVSVEELNYKTGLETVVSDQDKVSSLNG
GSENNSGVLKEEKVNGEDTAAKGSGFSYGEKERERFNKILKYYVGTHNFHNFTTRIKPED
PSAHRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEK
ALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAFEKEAEDFKMKYIYSHI
ASTEYKEGTVGLWLHSLNHRNYPDLRILDEEGVTDDKKTEIDTNDKKTEIEVVTE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcagataaaactccgacaagttcatccccgccgcggtcaccttcactagcg
gcggaagagtcagagtcgaagaagttgaagatgtctaccactacttctgatgatgaacaa
tgcacaactgctgaaggaaccaagataaggtacaagcgccgtaaggtggctattttcttt
gcttactgtggtgttggttatcagggtatgcagaaaaaccctggtgcgaagaccattgaa
ggtgaactagaagaagccttatatgtgtctggagctgtacctgaacaggatcgcggactt
tctaaacggtacgattgggctcggtcagctagaaccgataaaggagttagtgctgttggt
caggttgtctcgggccggttctacattgatccgcctggctttattgaccgtcttaattca
aaccttccctctcagatacgaatctttggttttaagcgagtgactgcttcttttagtgct
aagaagttctgcgaccggaggaggtatgtctatctcatccctgtgtttgctctcgatcca
tgttgtcatcgtgatagagagactgtattggctagtttagggtctgaaaatgagcttgtt
aagtgtttagagtgttctgagagaggtcgaaaggtggaaggtttgtttggtaatagtaag
cgcaatctggagcaagaagctgtggatgtggagaccgatggttcatcaaacagaactgct
gtggttaactctggagttgcagagaatgtggaggtctctttgagcaaaggtgatgatagt
cgtttgaataaagaatccattaatgacaatgagggtaaggtttcagttgaagaactgaac
tataaaactggtcttgagactgtggtttcagatcaggataaggtttcttctttaaatggt
ggatctgagaataattcaggcgttctcaaggaagaaaaagtgaacggagaggatacggct
gccaaaggaagtgggtttagttatggtgagaaggagagggagagatttaacaagattttg
aagtattatgtgggaactcataacttccataacttcacaaccagaataaaacctgaggat
ccttctgctcaccgtttcattatttcatttgacgcaagcaccactgttgtggtcgagggt
atggaatttgtgaagtgtgaaattgtgggacagagcttcatgcttcatcagatacggaag
atgatggggcttgccgtggcaatcatgagaaattgtgcacctgagtcacttatcgaaaaa
gctttgcagaaggatgttagcatcactgtgcctactgcacctgaggttggattgtatttg
gatgagtgcttctttacttcatataaccaaaagtggaaagacacccatgaagaggtatca
atgaaagcatttgaaaaagaagctgaggatttcaaaatgaagtacatatattctcatatt
gcttcaacagaatataaggaaggaactgttggcctatggttgcattctttgaaccataga
aactatccagacctgcgcatccttgacgaggaaggtgtcacagatgacaagaaaactgaa
attgacacgaatgacaagaaaactgaaattgaagttgtaaccgaatga
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