Trifolium pratense (red clover): 123899247
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Entry
123899247 CDS
T08949
Name
(RefSeq) SWI/SNF complex subunit SWI3B isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123899247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123899247
03036 Chromosome and associated proteins [BR:
tpra03036
]
123899247
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123899247
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123899247
PBAF complex
123899247
GBAF(ncBAF) complex
123899247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF2250
Motif
Other DBs
NCBI-GeneID:
123899247
NCBI-ProteinID:
XP_045806293
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All DBs
Position
LG7:1041586..1044671
Genome browser
AA seq
499 aa
AA seq
DB search
MATSTPERPAEPPSSAAEPPKIQTQPPISTPPPPPAKPPLTPPPSKPEVPLADPKPSPDT
SLILIPSHSRWFSWDSIHECEIRNIPDSSKNPRVYKYYRNSIVKHFRFNPNRKITFTDVR
KTLVGDVGSIRRVFDFLEAWGLINYHPSSSLSKPFKWDDKDSKPESGSNSTDSSSPAPVK
ETARRICSGCKTNCVVACFACDKVSYFWYSEKNDMTLCARCFVRGNYRIGMSNTEFKRVE
ISEATKTEWTEKETLNLLEAITFFGDDWKKVSHHVVGRTEKECVARFLKLPFGDQFLRYQ
QSESASLTDDGSHQLKPPADAEFESETVDSDKSSKRMRLTPLADASNPIMAQAAFLSALA
GTEVAHAAAQAALTTLTDVYKSTRTNYRPFQKNALPQDVGVASNGGNASDSIQGSLLRAD
LQCEKEESDVAKSISEIIEVQMKTIQDKLIKFEELDLLMEKESQQLEQVKSLFFLDQLNL
LFRKTSAPTTAEGNHVKRN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcaaccccagaaagacccgccgaaccaccgtcatccgccgccgaaccacct
aaaattcaaactcaacctccaatttctactccacctccacctcctgcgaagccaccacta
acaccaccgccgtcgaaaccagaagtcccactggcagaccccaaaccatctcccgacacc
agcttaatcctaatcccaagtcactcaagatggttctcatgggattccattcacgaatgc
gagattcgtaacattccagattcttccaaaaaccctagggtttacaaatactatagaaat
tctatagtaaaacatttcagattcaatcccaatagaaaaatcaccttcaccgatgttcgg
aaaacgctcgtaggtgacgtaggttcaattcgaagagtcttcgattttcttgaagcttgg
ggtttaatcaattatcatccttcttcttctctcagtaaacctttcaaatgggatgacaaa
gactcaaaacctgaatcaggatcgaattctactgattcttcttctccggcgccggtcaaa
gaaactgctaggagaatttgcagtggctgcaaaactaactgtgttgttgcttgctttgcc
tgtgacaaggttagttatttttggtattctgaaaagaatgatatgactttgtgtgcgagg
tgttttgttcgcggaaactatcgaattggtatgagtaatacagaattcaagagagtggag
attagtgaggcgacaaaaactgaatggactgagaaggaaacgttgaatcttcttgaagct
attacgtttttcggtgatgattggaagaaggtttctcatcatgttgttggtaggactgag
aaggaatgtgttgctcgttttcttaagcttccttttggtgatcaattcctgcgttatcaa
cagtctgagtctgcttctctcactgatgacggttctcatcagttgaagcctcctgctgat
gctgaatttgagtcagaaactgttgactcggataaatctagtaagagaatgcgtctcaca
cctcttgcggatgcaagcaatcctatcatggctcaggctgctttcctttctgctttagca
gggactgaggttgcacatgctgcggctcaagctgctctgacaactctgaccgatgtttac
aagtcaactagaactaactatcgaccatttcagaagaatgcattaccacaagatgttggt
gttgcatccaacggtggtaatgcttcagattctatccaaggatctctattgcgtgctgat
ttacagtgcgagaaggaagaatcagatgtggcaaaatcaatttctgagattatagaagtt
cagatgaaaactatccaggacaagcttatcaagtttgaagagttagacctgctaatggaa
aaagaatcccagcagttggagcaagtgaagagtttgtttttccttgatcagcttaacctt
ttatttcgtaaaacatctgcaccaacgaccgcagaaggcaatcatgtaaagaggaattga
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