Trifolium pratense (red clover): 123899430
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Entry
123899430 CDS
T08949
Name
(RefSeq) THO complex subunit 7A-like
KO
K13176
THO complex subunit 7
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123899430
09122 Translation
03013 Nucleocytoplasmic transport
123899430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123899430
03041 Spliceosome [BR:
tpra03041
]
123899430
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123899430
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123899430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
DUF2277
APG6_N
Motif
Other DBs
NCBI-GeneID:
123899430
NCBI-ProteinID:
XP_045806507
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All DBs
Position
LG7:complement(37032862..37035638)
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AA seq
242 aa
AA seq
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MIGRVRKVSGRGEPVAANYAFGPSVDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVSE
VDKDEDNYNDCEKLARAFLQELTTFEIPLLKSKAIVEANVREKDNFNELKDEMNRQILQA
QVDIEDLKKQLEESKVERRHKEECESIRKLIAMQPPRSETQKVLTELEKEIAALDAENTA
GSRLLELRKKQFSLLLHVVDELQNTIEEDQKSLVEEMRIATEELKHGMEDASGVPDAMAV
DH
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgattggaagagtgaggaaggtttcaggtcgtggagaaccagttgcagcaaattatgca
tttggtccttctgtagatgatgtaataatcaaacacaggcttttaacccgtacaacaaca
actagaggtgaacctccattgaaaaagcttcagaaaaagttcacatcttttgtatctgag
gttgataaagatgaagataactacaatgattgtgaaaagcttgcaagagcttttttgcaa
gagctaactacttttgagattcctcttttgaagagtaaagcaattgttgaagctaatgtt
agggagaaggataatttcaatgagttgaaagatgaaatgaatcgacagattttgcaggcg
caggttgatattgaggatctcaagaaacaattggaagagagtaaggttgagagaagacat
aaggaggagtgtgagtctattaggaaattgattgctatgcagccgccgagatctgagacg
cagaaggttttgacagagttggagaaagaaattgcagcgttagatgctgagaatactgct
ggttcgagattgttggagcttaggaagaagcagttttcgcttttgttgcatgtggtggat
gagttgcagaatacaatagaggaagaccagaagagtctagttgaggagatgagaatagca
actgaggagcttaagcatgggatggaggacgcaagtggggtgccggatgcaatggcagtt
gaccattaa
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