Trifolium pratense (red clover): 123900022
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Entry
123900022 CDS
T08949
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123900022
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
90S particles
Other 90S particles
123900022
Pre-60S particles
Other pre-60S particles
123900022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Dopey_N
RIX1
Motif
Other DBs
NCBI-GeneID:
123900022
NCBI-ProteinID:
XP_045807267
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All DBs
Position
LG7:complement(21022635..21035273)
Genome browser
AA seq
1145 aa
AA seq
DB search
MEEEHPETFNDASDLCQQLMDRYAKSPAPHHRHLLAVASVLRSNLSAESLPLTPPAYFAA
AISTAASSDSLDSVSLSSLASFMAIALPLVPTGAISSEKAREAAEIVGMLLVREGEGLGV
SSLRAAVKCVGVLLGFCDLEDWDSIKLGFETLLKFSIDKRPKVRRCGLESLEKFFRSLKS
STVVKDASRLVLSELKRCIDLTMKLTAPRTVDACKDNGISKNEHLEVLHVLNVVNLVAPN
LSPKIVPKVLSEVHKLFGSQIPALTRHVLKTVEAIFETSRVRNIVLELGDIVVSLASFVS
LGDKNPLDTVILAANVLKLAMDLLYTGQSSLWIKNLALVCQSMMGLLTSEGNTASQASNI
LNDVLKHRVGSQSLLISTDQTFDDDSQLSLEGNAIKSTCAVFENTLSAIDGIPNEHLLSV
ISVLFLELGGFSFVSMKNIVLKLADLMIQISDGKTNNEHIQKCIGSAVFAMGPERFLTFV
PISLDEHSYTYSNIWLVPILKQYITGASLSYYVEHIMPLAKSFKKASRKVKKSEVSQDLL
VRAQELWGLLPSFCRRAPDTYKSFSRLSDVLATFLKKDLSMHENVSTALQILVNENKAAL
SPKKNEADCDAEHDSSLEFSMRPAYSKKTATRNMNALKSNSNQLLHILSDLFISSLPQTR
ISLKGSISCLASIADSSITKEVFMSLLKRFELVDCDGEDEVLTSKALDIEPSDEKGCSQR
CATLEIASCLVEGANDNLVEIIYNLTIHSFQVSNESIRHEAYNTLSKILEVHPCYSSPKN
MELIDLLLGLKPPTEVASLRGRFACFHMLMVHIVKISLEEDVNSKAFLILNEIILTLKDG
NDEARKEACDLLLNISSSLGDLSCVGPTEPYHKLVSMIMGYLSGSSPHIKSGAVSALSVL
VYKDANLCVSISDLVPSLLSLLHSKDTETIKAVLGFFKVMVSCLEARELQNILSDVVSEI
IRWSSVSRHHFKTKVTVIFEILIRKCGSAAVRGVTPEKYMDFLKTVLENRHGKSNEASTI
DTENTPEVSAAKGSEWRKPNNSDTQENDSQQKKRKKFETGKTEQSKFRSNDEFRFAKRSR
HSNDTNSNGRSEGSKNGNKSQFKSFTHGGGKGKVKPQGMGKDKAASNGRIGASKSHKLKG
KFNRK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaacatccggaaacattcaatgacgcttctgacctttgccagcagctcatg
gaccgttacgccaaatctccagctccccaccaccgccacctcctcgccgttgcctctgtt
ctacgctctaacctctccgccgagtcgctccccctcacacctcctgcctatttcgccgcc
gccatctccaccgccgcgtcttccgactccctggactctgtatcactgtcctcgcttgcg
tccttcatggccatcgcacttccacttgtgccaactggcgctatctcgtcggagaaagcg
cgggaagcggcggaaattgttggaatgctgctggttagggagggggaggggttgggtgtt
tctagcttgagggctgcggtgaagtgcgttggggttttgcttgggttttgtgatttggag
gattgggattccatcaaattagggtttgaaactttgcttaagttctccattgataagcgc
ccaaaggttcgaagatgtggtctagagtctcttgagaagttttttcggtctctcaaatcc
tccacggttgtcaaggacgctagcaggttggttttgtctgagctgaaaaggtgcattgat
ttgacaatgaaattgactgctccgaggactgttgatgcatgtaaagataacggaatttct
aagaacgagcacctagaagtcctacatgtactaaatgtagttaatctggttgctcctaat
ctttctccaaaaattgttccgaaagttctttcggaagtgcataaattatttggttctcag
atccctgcgcttacaaggcacgtccttaaaactgtagaagctatttttgaaacttcaaga
gtccgaaatatagtcctagagttaggggacattgtagtttctcttgcttcttttgtatct
ttgggtgataagaacccattggatactgtgattttggcagcaaacgtattaaaacttgca
atggatttactttatactggacaatcaagcttatggatcaagaaccttgctctagtttgt
caatctatgatggggcttctaacttctgagggaaacactgcatcacaggcatcaaatatc
ttgaatgatgtgctcaagcatcgagttggttcccaaagcttattaattagtacagatcaa
acatttgacgatgatagtcagctaagtttggaaggcaatgcaataaaatcaacatgtgca
gtttttgagaacaccctctcagctattgatgggatcccaaatgagcatcttttgtcagtc
atatctgttttgtttcttgagcttggaggattctcatttgtatctatgaagaatattgtg
cttaaacttgctgacttgatgattcaaatttccgacggcaagactaataatgagcatatt
cagaaatgcattgggtctgctgtttttgctatgggacctgagagatttctcacatttgta
cctatatctcttgatgaacacagctatacttattcaaatatttggctagtgccgatcttg
aagcaatacattactggagcatcactttcttactacgtggagcatatcatgcctcttgca
aagtcctttaagaaggctagccgtaaagtaaaaaagtcagaggtcagtcaagatcttctg
gttcgtgcccaagaattatggggattgcttcccagcttttgtcgtcgtgcacctgataca
tacaaaagtttttctcgtctaagtgacgtgctggctacttttcttaaaaaggacctctcc
atgcatgaaaatgtttccacggcattacagattcttgtgaacgagaataaagctgcactt
agccctaaaaagaacgaggcagattgtgatgcagaacatgattcttcattagagttcagc
atgcgacctgcttattcaaagaaaactgctaccagaaacatgaatgccttgaaatcaaac
tcaaatcagctgcttcatattttatcagatttattcataagttcacttcctcaaacacgc
atttctttaaagggttcaatcagctgcctagcttcgatagcagattcttctataaccaaa
gaagtttttatgtctctgctcaagaggtttgagcttgtagattgtgacggtgaagatgaa
gtattgactagcaaagcgttggacattgagccaagtgatgagaaggggtgttctcaaagg
tgcgcgacattggagatagcatcttgtcttgttgaaggagccaatgataatcttgttgag
ataatttataatttaactatacattcctttcaggtaagtaacgagagtattcgtcatgaa
gcatacaacactttgagcaaaatcttggaggtgcacccatgctattcttctcctaaaaat
atggagctaattgatttattacttggtctaaagccgccaactgaagttgcttctcttaga
ggccggtttgcttgttttcacatgctgatggtacatatagtgaagattagtttggaagag
gatgtgaactcaaaggcttttcttattctcaatgaaatcatcctcacattaaaagatgga
aatgatgaagctaggaaagaagcttgcgatttactcttaaatataagttctagcttggga
gacttatcctgtgttggtcctaccgaaccatatcacaaattagttagcatgataatggga
tatctttccggttcatctccccatataaaaagtggagcagtatctgcgctgtcagttttg
gtatataaggatgcaaacctttgtgtctccatttctgatcttgtcccttctcttttatct
ttgcttcactccaaagatacggaaaccattaaagctgtcttgggcttttttaaagtgatg
gtgtcttgcttagaagcaagagagttgcagaatattctctcagatgttgtttctgaaatc
atccgttggtcgtctgtttcaagacatcattttaaaacaaaggtcacagtcatatttgaa
atattaattcgtaagtgcggttctgctgctgtgagaggggttaccccagagaagtacatg
gattttctcaagacagttttagagaatcgacatggaaaatcaaacgaagcatccactatt
gatacagaaaatacgcctgaagtttcagctgccaaggggtcggaatggaggaaacctaat
aattcagatacccaagagaacgacagtcaacaaaaaaagagaaagaaatttgagacaggc
aaaactgaacaatcgaagtttaggagcaatgacgaattcagatttgccaagagaagtagg
cattctaatgatacaaattcaaatggaaggtcagaaggaagtaaaaacggcaataaaagc
cagttcaaaagtttcactcacggtggtgggaagggaaaagtaaagccgcagggtatgggg
aaagataaagcagcttctaatggacgtataggagcatccaaatcgcacaaattaaaaggg
aaattcaatagaaagtaa
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