Trifolium pratense (red clover): 123900274
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Entry
123900274 CDS
T08949
Name
(RefSeq) ubiquitin receptor RAD23c isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03420
Nucleotide excision repair
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123900274
09124 Replication and repair
03420 Nucleotide excision repair
123900274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tpra03051
]
123900274
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123900274
Proteasome [BR:
tpra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123900274
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123900274
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Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_Ucp12
UBA_RAD5A
Ubiquitin_2
Dsc3_N
TECR_N
Rad60-SLD_2
NQRA_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
123900274
NCBI-ProteinID:
XP_045807456
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Position
LG1:complement(2362116..2366795)
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AA seq
456 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVTPQDTISDVKKNIETVQGVDVYPAAQQMLIHQGKVLKDGTTLE
ENKVAENSFIVIMLSKSKPASGEGSTASNAPPAKAPQTSAAPTSTPTVSVSQAPAATAAT
PASVAAPSPAPAATPAPISSATATEGSDVYGQAASNLVAGSNLEGTVQQILDMGGGSWDR
DTVIRALRAAFNNPERAVEYLYSGIPEQAEVPPVSRVPASAQPANPEAAAAAPQAAQPAP
VTSSGPNANPLDLFPQVTIAVFLTGKGNVFSVVYLTLCYRASQILVVLLVPALWIFSATV
NKYYFSLPVSAFALNLVLHRYVLNRLIFFFFPFLFQFQALRAMVQANPQILQPMLQELGK
QNPQLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAAGLPQPQSVTVTPEEREAIERLEA
MGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDEQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtcaagactcttaaaggaactcacttcgaaatcgaagtcacgccacaa
gacacgatttccgatgtgaagaaaaatatagaaactgttcagggtgtagatgtctatcct
gctgcacagcaaatgcttattcatcaagggaaagttctgaaggatgggaccaccttggag
gaaaataaagtagctgaaaatagtttcattgtaatcatgctttcaaagagtaagcctgcg
tccggtgaagggtctactgcttcaaatgctcctccagcaaaggctccacagacaagtgct
gctcctacttcaacccccacagtgtctgtatctcaagctcctgctgcaactgcggcaacg
cctgcatccgttgctgcgccttctccagctccagctgctactccggctcctatatcttca
gcaactgctacggaaggttctgatgtctatgggcaggcggcatccaatctggttgccggt
agcaacttggagggaacagttcaacaaatcctagatatgggtggaggaagctgggatagg
gatactgttattcgtgctcttcgagctgccttcaacaaccccgagagagcggttgaatat
ttgtattcaggtatccctgaacaagctgaagttccaccagtgtcccgagttcctgcaagt
gcacaacctgcgaatcctgaagctgcagctgcagctccacaagcagcacagcctgctcct
gttacctcaagtggacctaatgctaatcctctggacctctttccccaggtaacaattgct
gtgtttttaactggaaaaggaaatgtcttttcagtggtatacttaactctatgttacagg
gcctcccaaatattggtggtgctgctggtgccggctctctggattttctccgcaacagtc
aacaagtattatttttctctccctgtgtcagcatttgcactgaatttagtacttcataga
tatgttctaaatagattaatcttttttttcttcccattcttatttcagttccaagcatta
cgtgctatggtgcaggcaaatccacaaatattgcagcccatgctacaggagcttggcaaa
caaaatcctcaacttatgagattgattcgagatcatcaggctgacttccttcgcctgata
aatgaacctatggaaggtggcgaagggaacctattgggacagatggctgctggcttgcca
caaccacaatcagtaactgtcactcccgaggagcgcgaagcaattgaacgccttgaagca
atgggctttgatcgtgctatagtattggaggtgtacttcgcttgcaacaaaaacgaggaa
ttggccgccaactaccttttagaccacatgcatgagttcgacgaacaatga
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integrated database retrieval system
