Trifolium pratense (red clover): 123900967
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Entry
123900967 CDS
T08949
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic-like
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123900967
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpra01007
]
123900967
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123900967
Enzymes [BR:
tpra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
123900967
Amino acid related enzymes [BR:
tpra01007
]
Aminoacyl-tRNA synthetase
Class I (G)
123900967
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123900967
Prokaryotic type
123900967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1f
CysS_C
tRNA-synt_1
Tfb4
Dicer_PBD
DUF4238
Motif
Other DBs
NCBI-GeneID:
123900967
NCBI-ProteinID:
XP_045807514
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Position
LG1:2712733..2717802
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AA seq
534 aa
AA seq
DB search
MAEERVELRLYNSMTREKDIFNTKVPGKVSMYVCGITAYDYSHLGHARAAVSFDILYRHL
KHLGYEVTYVRNFTDVDDKIIDKANETGEDPLALSNRFCDEYNVDMSDLLCERPSKEPRV
SDHIDEIKDMITKIINNDYAYVVDGDVFYSVEKFPNYGMLSGQRVEHNKAGKRVAVDSRK
RHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYVSHKFDIHGGGIDLIFPHH
ENEIAQSWAADRESHISYWLHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLIG
AHYRSPLNYSIAKLETSSDAVYYIFQTLEDCKDALSSFLQEDTEKKEKAPKINDAAKECI
KKLNVEFQTKMSDDLQTPVILTGALQEALKFMNSSSKMLKKKMQKKTQLQLVQSLLEVEK
EVRKVLNVLGLLSSLSYAEVLQQFKEKALKRAGLTEDEVLNLIEERRQARINKDFAKSDE
VRTGLTEKGIALMDVGNETIWRPCIPSEPPRTGFIYYYFKAICTFIYKLIKLFI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgagtcgagttgaggctgtacaattcgatgactagagagaaggacatt
ttcaacaccaaagtacctggcaaggtttccatgtatgtctgtggaatcactgcctatgac
tacagtcatctcggtcacgcacgtgctgctgtttctttcgatatcctctataggcacctt
aaacatttgggctatgaggtgacatatgtgcggaattttactgatgttgatgacaagata
attgataaagccaatgagactggtgaggaccccttggcgttaagcaaccgtttttgcgat
gaatataatgtggatatgtcggatcttctgtgcgagagaccgtctaaggagccccgtgtt
tctgaccacattgatgagataaaggacatgataaccaagattatcaacaacgactatgca
tatgtggtagacggagatgttttctattctgttgaaaaattcccaaactatggcatgctg
tcggggcaaagggtagaacataataaagctggtaaacgagttgctgtcgactcaagaaag
cgtcacccagctgattttgctttgtggaaggctgctaagcctggtgagcccagctgggac
agtccttggggtcctggaaggcctggatggcacattgaatgtagtgcaatgagtgcttgt
tatgtatctcataaatttgatattcatggtggtggaattgatttgatatttcctcatcat
gaaaatgagattgcacaaagctgggctgcagacagagagagccatatcagttattggttg
cacaacgggcatgtgaccaataacaatgagaagatgtcgaaatccttgggaaattttttc
actattcgccagatcactgagcgttaccatccacttgctttgagacacttcttgattggt
gctcattacagatctccgctaaactactccattgcaaagctggagacttcatctgatgct
gtttattatatatttcagactcttgaagattgtaaagatgctctgtcatcatttctacaa
gaggatactgagaagaaagaaaaggcgcctaaaattaatgatgctgccaaggagtgtatt
aagaagttgaatgtcgagtttcaaacaaaaatgtcagatgacttgcagacaccagtaata
ctaaccggtgctctccaagaggccttgaaattcatgaacagttcttcgaagatgctgaag
aaaaagatgcagaaaaaaacacaattgcaattggttcaatctctattggaagttgagaaa
gaagttagaaaagttttgaatgtactaggattattgtcctctttgtcctatgccgaggtt
ctgcagcagttcaaagaaaaggcattgaagagagcaggcttgacagaagatgaagtgcta
aatctgattgaagaaagaaggcaagctaggattaataaggattttgccaagagtgatgaa
gttagaactggtttaactgaaaagggtattgcacttatggatgtcggcaacgaaacaatt
tggaggccatgcattccaagtgaaccaccgcgcaccggatttatttattattatttcaag
gcaatttgtacttttatttataaattgattaaactatttatttaa
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