Trifolium pratense (red clover): 123900977
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Entry
123900977 CDS
T08949
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic-like
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123900977
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpra01007
]
123900977
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123900977
Enzymes [BR:
tpra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
123900977
Amino acid related enzymes [BR:
tpra01007
]
Aminoacyl-tRNA synthetase
Class I (G)
123900977
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123900977
Prokaryotic type
123900977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
DUF4238
Tfb4
WASH-7_mid
Dicer_PBD
DALR_2
Motif
Other DBs
NCBI-GeneID:
123900977
NCBI-ProteinID:
XP_045807523
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Position
LG1:2719356..2724462
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AA seq
554 aa
AA seq
DB search
MADERVELRLYNSMTREKDIFNTKVPGEVSMYVCGITAYDYSHLGHARAAVSFDILYRYL
KHLGYEVTYVRNFTDVDDKIINRANETGEDPLALSNRFCDEYNVDMSDLLCERPSKEPRV
SEHIDEIKDMITKIIDNDYAYVVDGDVFYSVEKFPNYGMLSGQRVENNRAGERVAVDSRK
RHPADFALWKTAKPGEVSWDSPWGPGRPGWHIECSAMSACYLSHKFDIHGGGMDLIFPHH
ENEIAQSWAADNESHISYWLHNGHVTTNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS
AHYRSPLNYSIAQLETSSDAVYYIFQTLEDCKDALSSFLQEDSEKKEKAPQINDAAKECI
KKLNVEFQTKMSDDLQTPVILTGALQEALKFVNSSSKMLKKKMQKKTQLQLVQSLLEVEK
EVRKVLNVLGLLSSLSYAEVLQQFKEKALKRAGLTEDEVLNLIEERRQARINKDFAKSDE
VRTGLTAKGIALMDVGNETIWRPCIPSEPTAAQAVQTDNKAPKVEEKLSTLAVSENVEEI
PADREGNGPHAPST
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaacgagttgagttgaggctgtacaattcgatgactagagagaaggacatc
ttcaacaccaaagtacctggcgaggtttccatgtatgtctgtggaatcactgcctatgac
tacagtcatctcggtcacgcacgtgctgccgtttctttcgatatcctctataggtacctt
aaacatttgggctatgaggtgacatatgtgcggaattttactgatgttgatgacaagata
attaaccgagccaatgagactggtgaggatcccttggcgttaagcaaccgtttttgcgat
gaatataatgtggatatgtcggatcttctgtgtgagagaccgtctaaggagccccgtgtt
tctgaacacattgatgagataaaggacatgattacgaagattatcgacaatgactatgca
tatgtggttgacggagatgttttctattctgttgaaaaattcccaaactatggcatgctg
tcggggcaaagggtagaaaataatagagccggtgaacgagttgctgttgactcgagaaag
cgtcacccagctgattttgctttgtggaagactgctaagcctggtgaggtcagctgggac
agtccgtggggtcctggaaggcctggatggcacattgaatgcagtgcaatgagtgcttgt
tatttatctcataaatttgatattcatggtggtggaatggatttgatctttcctcatcat
gaaaatgagattgcacaaagctgggctgcagacaacgagagtcatatcagttattggttg
cacaatgggcatgtgaccactaacaatgagaagatgtcgaaatccttgggcaattttttc
actattcgccagatcactgagcgttaccatccacttgctttgagacacttcttgattagt
gctcattacagatctccgctaaattactccatcgcacagctggagacttcatctgatgct
gtttattatatatttcagactcttgaagattgtaaagatgctctgtcatcatttctacaa
gaggactctgagaagaaagaaaaggcgcctcaaattaatgatgctgccaaggagtgtatt
aagaagttgaatgtcgagtttcaaacaaaaatgtcagatgacttgcagacaccagtaata
ctaaccggtgctctccaagaggccttgaaatttgtgaacagttcttcgaagatgctgaag
aaaaagatgcagaaaaaaacacaattgcaattggttcaatccctattggaagttgagaaa
gaagttagaaaagttttgaatgtactaggattattgtcctctttgtcctatgccgaggtt
ctgcagcagttcaaagaaaaggcgttgaagagagcaggtttgacagaagatgaagtgcta
aatctgattgaagaaagaaggcaagctaggattaataaggattttgccaagagtgatgaa
gttagaactggtttaactgcaaagggtattgcacttatggatgtcggcaacgaaacaatt
tggaggccatgcatcccaagtgaaccaactgctgcacaagctgttcagacagacaacaag
gcacccaaagttgaggaaaaattgtcgacacttgcagtgagtgaaaatgtggaggaaata
cccgcggatcgcgaagggaatggtccacatgcaccatcaacataa
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