Trifolium pratense (red clover): 123901694
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Entry
123901694 CDS
T08949
Name
(RefSeq) putative pectate lyase 21 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123901694
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123901694
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123901694
NCBI-ProteinID:
XP_045807645
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Position
LG1:857149..859831
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AA seq
363 aa
AA seq
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MQPYGDVDSTLRAIAGRAEGFGRHAIGGLHGALYLVTSLSDDGPGSLREGCRRQEPLWIV
FEVSGTIHLSSYLSVSSNKTVDGRGQRVKLTGKGLRLKECENIIICNLEFEGGRGHDVDG
IQIKPNSRNIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPTHVGDR
CIRVTIHHCFFDGTNQRQPRLRFGKVHLYNNYTRNWKVYAICASVEAQVTLLLSSRAFHF
LILHSNLCAAIVEIADFSKIILQIYSQCNIYEAGDKKKAYEFYTEKAADKEEAKSGIIIS
EGDMLLNGAQPCLLTEYKESVFHPSEYYSTWTMEPATHSLREVIQLCTGWQSLCRPVDNM
VMN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcagccatacggagatgttgattccactttgagggccatcgccggtcgtgccgaggga
ttcggccgccacgccatcggtggtctccacggtgctctctatttggttacctccctttca
gatgatggtcctggttcccttcgcgaaggatgtcgtagacaggagccgctgtggattgtt
tttgaagtttcaggtacaattcatctttcatcatacctgagtgtgtcctctaataagaca
gttgatggaagaggccagagggttaaattgaccgggaaaggcttaaggctgaaagaatgt
gagaacataattatatgcaaccttgagtttgaggggggaaggggtcatgatgtagatggg
attcaaatcaaaccaaattctaggaatatttggatagaccgttgcagcctccgagattat
gatgacggccttatagacatcacaagacaaagtacggatatcactgtatctagatgttac
tttgcacagcatgacaagaccatgctcattggagccgacccaacacatgtcggtgataga
tgcatccgggtgacgattcatcattgtttctttgatggaacgaaccagagacagcctcgt
ttgagatttggaaaagttcatctgtacaacaattacaccagaaactggaaagtatatgca
atttgtgctagtgttgaggcccaggtgactttgctgctatcatcccgtgcatttcatttt
cttattttacattctaatttatgtgcagcaattgtggagatagctgatttctctaaaatc
attttacagatatactcccaatgtaacatatatgaagcaggagataagaaaaaggcttat
gaattttataccgagaaggctgcggacaaagaagaggcgaagtctggcatcataatatct
gaaggagacatgcttctgaatggtgctcagccatgcttgctaacagaatataaagaatct
gttttccatcctagtgaatattactcaacttggacaatggaacctgctacacattctctc
agagaggttatccagttatgtacaggttggcagtccctttgcaggccagtagacaatatg
gtaatgaactag
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