Trifolium pratense (red clover): 123902130
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Entry
123902130 CDS
T08949
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00061
Fatty acid biosynthesis
tpra00071
Fatty acid degradation
tpra01100
Metabolic pathways
tpra01212
Fatty acid metabolism
tpra04146
Peroxisome
Module
tpra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
123902130
00071 Fatty acid degradation
123902130
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123902130
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpra01004
]
123902130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123902130
Enzymes [BR:
tpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
123902130
Lipid biosynthesis proteins [BR:
tpra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
123902130
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
123902130
Exosomal proteins of breast cancer cells
123902130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
123902130
NCBI-ProteinID:
XP_045807746
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All DBs
Position
LG1:complement(25556730..25563002)
Genome browser
AA seq
662 aa
AA seq
DB search
MKNFSVKVEEGREGRNGMLSIGPVYRNLLAKNQYPPLDPDFTSAWDIFSMSVKKHPQNRM
LGWRKIVDGKLGPYVWKTYKEAYEEALEIASALRACGAESGSKIGIYGSNCPQWIIAMEA
CSAQNLICVPLYDTLGPGAVNFIIDHAEIDFVFVQDKKVKELLNPECVSSKRLKAIVSFT
SFTEKEKNEATNIGIQPYSWDEFVHMGKENPSSISPPKTHDICTIMYTSGTSGDPKGVVL
THENVLALVRGMDLFMEQFEDKMTVDDVYLSFLPLAHILDRCIEEYFFRNGASVGYYHGD
LNALLEDLGELKPTLFAGVPRVFEKVYEGIKKAVAQLNPVRRTVFGMLYNYKLGWMNKGY
KQKDASPFADLLAFRKVKARLGGRVRLIISGGAALSSEIEEFLRVTTCAFVCQGYGLTET
CGPTTLTFPDEMCMLGTVGAVSLYNELMLEEVPDMGYNPLGTPPCGEICIRGKTVFTGYH
KNPELTKEAIKDGWFHTGDIGEMLPNGIIKIIDRKKNLIKLSQGEYIALEYLENVYTITP
IVEDIWVYGNSFKSMLIAVVVPNEDFTNKWAYANGHISSFSKLCSLDQLKKYVLSELKST
AVRNKLKGFEHIKGVILDPVPFDMERDLVTATLKKKRNNMAKYYKAEIDELYQSLTGDKL
KF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttttcagttaaggttgaagaaggaagggaaggtagaaatggcatgctatct
attggtcctgtttaccgtaatcttctagccaaaaatcaataccctccattggaccctgat
ttcacttctgcttgggatattttcagtatgtctgtcaaaaaacatcctcaaaatcgcatg
ctcggatggcgtaaaattgttgatggaaagttaggaccatatgtttggaagacatacaag
gaagcttatgaggaagctttggaaattgcttctgctttaagagcatgtggggctgaatct
ggctctaaaattggaatttatggatctaactgtccacaatggattattgcaatggaggct
tgttctgcacaaaaccttatttgtgtgcctctatatgacacccttgggcctggtgctgta
aattttataatagatcatgcagaaatagactttgtttttgttcaagataagaaggttaaa
gagcttctgaatcctgaatgtgtatcatctaagagactgaaagccatagtgagcttcact
tcattcactgagaaagagaaaaatgaggccacaaacattggaattcaaccatattcatgg
gatgaattcgtgcatatgggtaaagaaaatccgtcaagtatttctcctcctaagactcat
gatatatgcacaataatgtatacaagtggaacaagtggagatcctaaaggtgttgtttta
acgcatgaaaatgtactggctttagtaagaggaatggatcttttcatggaacaatttgag
gacaagatgactgtggatgatgtgtatttatccttcctccctttagctcatattcttgat
cgatgtatcgaagaatacttttttcgtaatggtgcatctgttggctactatcatggggat
ttgaacgcattgctggaggatttaggcgagttaaagccaacactgtttgctggtgttccg
cgggtttttgaaaaagtatatgaaggtatcaagaaagcggtggcgcaactaaatccagtg
aggagaaccgtttttggcatgctctacaactataaacttggttggatgaacaaagggtac
aaacagaaagatgcatcaccttttgctgatctactagcattcagaaaggtgaaagcaagg
ctaggtggacgtgttagactgataatatctggaggtgcagccttaagctctgagattgaa
gaattcttgcgtgttactacttgtgcctttgtatgccaaggctatggtttgacagaaaca
tgtggacctactactcttacatttcctgatgaaatgtgcatgctaggcactgttggagct
gtatctctatacaatgaattgatgttggaggaggttccagacatgggttacaatccttta
ggaactcctccatgtggtgaaatatgtataagagggaaaactgttttcactggttaccat
aaaaatcctgagttaacaaaagaagccataaaagatggttggtttcacacaggagacata
ggagaaatgcttcctaatggtattattaagattattgataggaaaaagaatcttattaaa
ctttctcaaggagagtatatagcacttgagtatcttgaaaatgtttatacaatcactcca
atagttgaagatatttgggtgtatggaaatagcttcaaatcaatgctgattgcagttgta
gttccaaatgaagattttactaataagtgggcttatgcaaatggtcacatatcttctttc
tcgaaactctgttctcttgaccaattgaagaaatatgtgttatctgagctcaaatctacg
gccgtgagaaacaagttgaagggatttgaacatatcaaaggggttatattagacccggtt
ccatttgacatggaaagagacttggtgactgcaacattaaaaaagaaaaggaacaacatg
gccaagtattataaggcggagatagatgagctataccaaagtttgacgggagataagctt
aaattttga
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