Trifolium pratense (red clover): 123902162
Help
Entry
123902162 CDS
T08949
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123902162
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
123902162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Tir_receptor_C
DUF5943
Motif
Other DBs
NCBI-GeneID:
123902162
NCBI-ProteinID:
XP_045807779
LinkDB
All DBs
Position
LG1:25901828..25903841
Genome browser
AA seq
566 aa
AA seq
DB search
MESKVLVSAVSLILVVGVALGVVAVVRTSNKPGEDGSQLNAHTKAVETVCQGSDDRKFCT
DTLNPVNTSDPNDYIKAVVKTSMESVIKAFNMSDTLAVENDKGNSTVKMALDDCKDLLQS
AIQELQASNVLIHDNNSQNVTQRTAELKNWLGAVVAYQQSCLDGFNTDGEKQVQSQLQTG
SLDDVQKLTALALDVVSAVAKVLDAFNLDLDVKTSSRRLFEVEDEDGEGYPEWMAAADRR
LMADMSTGMSVTPNAVVAKDGSGQFKTVLDAINSYPKNHVGRFVIYVKAGVYDEYILVDK
KKPNLLLYGDGPTKTIITGSKNFVDGWKTMRTATFSTVADDFMAKAMAFENTAGASKHQA
VALRVQGDRSAFFDCAIRGYQDTLYAHAHRQFYRNCEISGTVDFIFGYSATVIQNSKIII
RKPEANQQNIVVADGTDQKNMPTGVVLQNCEIMPEAELQADRLTVRSYLARPWKAYSRAI
FMENTIGDLIQPDGYLPWSGTQFLDTCYFAEYANTGPGSDVKARVKWGKGVLTKADAMKY
TANEWIQAGMWLPATGIPFELGFTKA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaaagtacttgtttcagctgtttctcttattcttgtagtaggtgttgcctta
ggtgttgttgctgttgttcgaacgtcgaacaaacccggtgaggatggttctcaattgaat
gcacatactaaagctgttgaaactgtatgtcaaggtagtgatgataggaaattttgtact
gacactcttaatcctgttaatacctcggaccctaatgattatataaaagccgtggttaaa
acatcgatggaaagtgtcatcaaagccttcaacatgagcgatacgctagcagttgaaaat
gacaaaggtaactcgactgtaaaaatggcgctcgatgattgtaaagatttgttacaatcc
gcgatacaagaattacaagcctccaatgttttaattcatgataacaattctcaaaatgtt
actcaacgtaccgcggagcttaaaaattggttaggtgccgttgttgcttaccaacaatcg
tgtcttgacggttttaataccgatggtgaaaagcaggttcagtcgcagttgcagacaggt
agtttggatgatgtacaaaaacttacggcattagcacttgatgttgtgtctgcggttgca
aaagtacttgatgcatttaatttggatttggatgtgaaaacttcgtctcgtaggcttttt
gaagtcgaggatgaagacggagagggttacccagaatggatggccgctgcagatcgtagg
ctaatggctgatatgagtaccggaatgtctgttacgcctaatgcagttgttgccaaagat
ggtagtggtcaatttaaaacggttcttgatgctattaattcttatccgaaaaatcatgta
ggtagatttgttatctacgtgaaggctggtgtctatgatgaatatattctggttgacaag
aaaaagccgaatcttttattatatggcgacggccctacaaaaaccattatcaccggtagt
aagaattttgtagatggttggaagactatgcggacggctacattctctactgttgcggat
gatttcatggcaaaggcaatggcattcgagaacacagcaggagcaagcaaacatcaagca
gtagcacttcgtgtacaaggtgaccgatcagctttctttgactgcgccatacgaggttac
caagacacattatatgcacacgcccaccgtcaattctacagaaactgcgaaatttcaggc
acagttgatttcattttcggctactcagcaacagtaatacaaaactccaaaataataatt
cgaaaaccagaagcaaatcaacaaaacatagtagtagcagatggaacagatcaaaagaac
atgccaacaggagtagtacttcagaattgtgagattatgccagaagcagaattacaagct
gatagattaacagttagatcatatttagcgagaccatggaaagcgtattcgagagcaata
tttatggaaaatactataggtgatttaattcaaccagatggatatcttccttggtcaggg
actcaatttcttgatacatgttattttgctgagtatgctaatactggacctggttcagat
gttaaagcaagagttaaatggggaaaaggtgttcttacaaaagctgatgcaatgaaatat
actgctaatgaatggattcaagctggtatgtggttacctgctactggtataccctttgaa
cttggattcactaaagcttga
DBGET
integrated database retrieval system